Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2329 ATGGCTAAGTCGAAGAACCACACTGCTCACAACCAGTCCTACAAGGCCCACAAGAATGGCATCAAAAAGCCAAAGAGGCACCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAACCAGAGGTACGCGAGGAAGCATAACAAGAAGAGCGGCGAAACAGCCACGGAAGAAGATTTACTTTGTGGTGATAAAACTAGGGAAAGAACGAATAGTAATTAG 228 0.4737 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEEDLLCGDKTRERTNSN 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2329 75 Gene3D - 1 62 - -
Aed6g2329 75 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Aed6g2329 75 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Aed6g2329 75 MobiDBLite consensus disorder prediction 1 32 - -
Aed6g2329 75 MobiDBLite consensus disorder prediction 1 75 - -
Aed6g2329 75 MobiDBLite consensus disorder prediction 49 75 - -
Aed6g2329 75 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2329 Aed-Chr6 25193273 25195664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2329 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 83.607 2.22e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2329 K02905 - gmx:100777189 130.568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2329 6 25193273 25195664 Aed4g0643 4 5475922 5482434 PCT