Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2317 ATGGCGTTTTGGTGGCCGTTGCTCGTACCTCCGAGGGGAACATCGCAGCAATCAGGCAAGATAGTTCAGTGCTACGAGCCTGCAACTATGAAATACTTAGGATATGTTCCTGCATTGACACACGATGAGGTCAAAGATCGAGTGGCAAAAGTAAGGAAGGCACAAAAAATGTGGGCAAAGTCCAGCTTCAAGCAAAGACGCTTATTTCTGCGTATACTTTTAAAGTATATAATTAAACATCAAGCGCTTATATGCAAAATATCTTCGCGTGATACTGGAAAGACAATGGTAGATGCCTCTTTAGGAGAAATAATGACAACATGTGAGAAGATCAATTGGCTACTGTCAGAGGGTGAGCAGTGGTTAAGGCCTGAATACCGGTCTTCTGGAAGATCAATGCTTCATAAGAGAGCTAAAGTAGAATTTCATCCCCTTGGTGTTATTGGAGCCATTGTTTCATGGAATTATCCCTTCCACAATATTTTTAATCCTATGCTGGCTGCAATTTTTTCTGGAAACGGTATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCCCTTACTGCCATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCATTGGTATCTTCTGTTGATAAAGTCATATTTGTTGGATCGCCTGGTGTTGGTAAAATGATAATGAACAATGCTGCTAACACACTTATACCAGTGACACTGGAGCTTGGTGGGAAAGATGCATTTATTGTTTGTGAAGACGTAGATCTGGACCATGTTGCACAAATTGCTGTCAGGGCTGTACTTCAGTCAAGTGGACAGAACTGTGCTGGAGCAGAGCGATTTTATGTCCATAGGGAAATTTATTCTTCTTTTGTTAGCAAAGTTACCAAAATTGTGAAGTCTGTTACAGCTGCGTTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGATGAGGAGGTTGTCAGGCTTGCAAATGACTCAAAATATGGGCTCGGATGTGCTGTTTTCTCAGGCAATCAGAGCCGTGCCAGAGAGATAGCTTCACAGATACATGCTGGGGTAGCTGCAGTTAATGATTTTGCATCAACATACATGTGTCAGTCCCTACCATTTGGGGGTGTGAAACATAGTGGATTTGGACGATTTGGTGGTGTAGAAGGTTTGCGAGCTTGCTGTCTTGTTAAAGCAGTTGTTGAAGATCGATGGTGGCCATTTTATCCTGTTGCAGAGAATGGATTCGAATTTCAGGAGTCACTTGTTGAAGCGCTTTATGGTCTCGGCATATGGGACCGTTTGCGAGCTTTAGTAAACGTTTTAAAAATGCTTACTGAGAAGAATCCTGGTGGCACTGGCAGCAGCAATAAGAGAAGAAATGACTGA 1422 0.4248 MAFWWPLLVPPRGTSQQSGKIVQCYEPATMKYLGYVPALTHDEVKDRVAKVRKAQKMWAKSSFKQRRLFLRILLKYIIKHQALICKISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLRPEYRSSGRSMLHKRAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQSALTAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNAANTLIPVTLELGGKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIVKSVTAAFGPIMPIMKFSSDEEVVRLANDSKYGLGCAVFSGNQSRAREIASQIHAGVAAVNDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFYPVAENGFEFQESLVEALYGLGIWDRLRALVNVLKMLTEKNPGGTGSSNKRRND 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2317 473 SUPERFAMILY ALDH-like 18 421 IPR016161 GO:0016491
Aed6g2317 473 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 8 316 - -
Aed6g2317 473 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 281 292 IPR016160 GO:0016491
Aed6g2317 473 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 253 260 IPR029510 GO:0016491
Aed6g2317 473 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 318 416 - -
Aed6g2317 473 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 261 316 IPR016163 GO:0016620
Aed6g2317 473 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 318 382 IPR016163 GO:0016620
Aed6g2317 473 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 318 416 - -
Aed6g2317 473 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 383 411 IPR016162 GO:0016491
Aed6g2317 473 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 260 IPR016162 GO:0016491
Aed6g2317 473 Pfam Aldehyde dehydrogenase family 318 411 IPR015590 GO:0016491
Aed6g2317 473 Pfam Aldehyde dehydrogenase family 16 316 IPR015590 GO:0016491
Aed6g2317 473 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 8 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2317 Aed-Chr6 25135526 25142635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2317 269 460 Aldehyde Dehydrogenase Gene Family AT3G66658 60.891 3.05e-76 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2317 - - gmx:100802990 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2317 6 25135526 25142635 Aed6g2317 6 25135526 25142635 ECH