Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2311 ATGGAAACTCCACCAACGGATGAGCTCATGAAGAAGATCCAACAGCTGGAGGAAGGACACGCGCACCTGAAGCAAGAAATGTCGAAACTGAAACTCTCCGATGTGAGACACGGCCATCGCCAGAGGTCGCACTCCGTGTCTCCGCAGCGTTCCAGATTCGGCGCTCCGCCGAATAAGCGGAGCGATGCACCGGCTGCTTGGAAGAGAGGTTCGTGTTCCTTCAAACAGTCGTCGCCGCTGCAGAGGGAGAGTCGCGGCGGCGGCGATCCTCAAATTCACGGAGGAGAAGAAGCTGCTCCGCGCCGTGGTCCTTCCGCCGTCAATTTCACGGAACGGCAGTATCTTAATATTTTGCAGTCAATGGGACAGTCTGTTCATATATTGGATCTTAACTGCCGCATAATATACTGGAACCGTAGTGCGGAAAATCTATATGGTTATACAGCAGAGGAAGCTTTAGGGCAGGATGGGATTGAGCTACTTGTAGACCCTAGGGATTTGGCCTTGGCCAATGATACAGTGAACCGTGTTATGATGGGAGAGAACTGGAGGGGACAATTTCCGGTCAAGAATAAGACGGGGGAGAAGTTCTTAGCTGTAGTGACTAATACACCTTTCTACGATGATGATGGAACCTTAGTTGGCCTAATTTGTGTCTCTAGTGATTCACGGCCCTTTCTTGAAATGAAGGTTCCAATGTCTAGCTTAAGGAACACGGAGTCAGATTCAGATTCAGGTGGAACCCAACCTAGAGGTAGCATTTCAAATAAACTCGGCATTGACACTCAACAGCCACTTCAAGCTGCTATTGCTTCAAAGATTTCAAATTTGGCATCGAAGGTGAGTAACAAAGTTAAGTCAAGGATCTGGACGGGAGAAAACAATGTGGATCGTGAAGGTGGGAGTGGTGAAAGTCATCATTCTGAGCATGGTTTGTTGGAATCTGTTTTTTCGGACCAGAGAGAGGATGCTAATTCCAGTGGAGCTAGCACCCCCAGAGGTGATGTGCCACCATCCCATTTCAGTACGTTTTCTCATGTTGAAGAAAAATCCCAGGGAAAGGCTCTGAGAGAATCTGGTGATGAGAGTGAAGGAAAGTCTATTCACAAAATCATACCTAAGGCTGAAGCCTGGATTCAAAGGAAAACATTGTCATGGCCATGGAGAACAAAAGAGCGAGAAGGATCAGATGCAGGGAATGCTCATGTTGCTGGGCCCTGGAGACAGAATGATCAAGAAAATGAATCAGTTAATCAGAAGATTCTTTCTTCTGGCTTGAAGCAAGAAAGCCAGGCAGGTGAAAGTAATCGCCCTAATAACAACGAGGCTTCAGGATCCTGGTCCTCCTTTAATGTTAACAGCACAAGTAGTGCCAGCAGCTGTGGGAGTGCTGGCAGTGGTGCTGTCAATAATAAAGTGGATGTGGACACTGATTGCTTGGATTATGAAATTCTGTGGGAGGACCTGACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCCGTCAAAGTTTTCTCAAAGCAAGAATATTCAGACGACGTGATACTGTCCTTCAGACAAGAGGTTTCTGTCATGAAAAGACTTCGACACCCAAATATTCTTCTCTTCATGGGGGCCGTGACTTCATCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTGCCGCTTGTTACACAGAAACACATCTAAACTTGACTGGAGACGGCGAGTTCATATGGCCTTGGATATTGCACGAGGCGTAAATTATCTTCATCATTGTAACCCACCTATCATCCACAGAGATTTGAAGTCTTCAAATCTTCTAGTTGATAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGTCTTAAGCATGAAACATATCTCACAACTAAGACAGGAAGGGGCACGCCTCAATGGATGGCACCGGAAGTTCTTCGCAATGAACCCTCCGATGAGAAATCTGACGTTTACAGCTTTGGAGTAATATTATGGGAAATTGCAACCGAAAAGATACCTTGGGATAATCTCAACTCAATGCAGGTGATTGGAGCTGTAGGATTCATGAATCAACGGCTAGAAATTCCAAAAAATGTTGATCCACGGTGGGCTTCTATAATTGAGAGCTGCTGGCATAGCGATCCAGCTTGCCGGCCAACGTTCCCAGAACTGCTTGAAAGGCTTAAAGAGCTGCAAAAACAGTATGCCATTCAGTTTCAGGCAGCCCGATCCACTGTCAAGGAAAGCACACAAAAGGAGTCCTAA 2304 0.4631 METPPTDELMKKIQQLEEGHAHLKQEMSKLKLSDVRHGHRQRSHSVSPQRSRFGAPPNKRSDAPAAWKRGSCSFKQSSPLQRESRGGGDPQIHGGEEAAPRRGPSAVNFTERQYLNILQSMGQSVHILDLNCRIIYWNRSAENLYGYTAEEALGQDGIELLVDPRDLALANDTVNRVMMGENWRGQFPVKNKTGEKFLAVVTNTPFYDDDGTLVGLICVSSDSRPFLEMKVPMSSLRNTESDSDSGGTQPRGSISNKLGIDTQQPLQAAIASKISNLASKVSNKVKSRIWTGENNVDREGGSGESHHSEHGLLESVFSDQREDANSSGASTPRGDVPPSHFSTFSHVEEKSQGKALRESGDESEGKSIHKIIPKAEAWIQRKTLSWPWRTKEREGSDAGNAHVAGPWRQNDQENESVNQKILSSGLKQESQAGESNRPNNNEASGSWSSFNVNSTSSASSCGSAGSGAVNNKVDVDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSVMKRLRHPNILLFMGAVTSSQRLCIVTEFLPRGSLCRLLHRNTSKLDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEIATEKIPWDNLNSMQVIGAVGFMNQRLEIPKNVDPRWASIIESCWHSDPACRPTFPELLERLKELQKQYAIQFQAARSTVKESTQKES 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2311 767 ProSiteProfiles Protein kinase domain profile. 489 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2311 767 SUPERFAMILY Protein kinase-like (PK-like) 479 741 IPR011009 -
Aed6g2311 767 MobiDBLite consensus disorder prediction 320 349 - -
Aed6g2311 767 SUPERFAMILY PYP-like sensor domain (PAS domain) 110 222 IPR035965 -
Aed6g2311 767 TIGRFAM sensory_box: PAS domain S-box protein 111 222 IPR000014 -
Aed6g2311 767 Gene3D Phosphorylase Kinase; domain 1 482 566 - -
Aed6g2311 767 Gene3D PAS domain 122 225 - -
Aed6g2311 767 MobiDBLite consensus disorder prediction 350 369 - -
Aed6g2311 767 SMART pas_2 112 179 IPR000014 -
Aed6g2311 767 MobiDBLite consensus disorder prediction 407 449 - -
Aed6g2311 767 MobiDBLite consensus disorder prediction 235 259 - -
Aed6g2311 767 PRINTS Tyrosine kinase catalytic domain signature 649 659 IPR001245 GO:0004672|GO:0006468
Aed6g2311 767 PRINTS Tyrosine kinase catalytic domain signature 712 734 IPR001245 GO:0004672|GO:0006468
Aed6g2311 767 PRINTS Tyrosine kinase catalytic domain signature 563 576 IPR001245 GO:0004672|GO:0006468
Aed6g2311 767 PRINTS Tyrosine kinase catalytic domain signature 668 690 IPR001245 GO:0004672|GO:0006468
Aed6g2311 767 PRINTS Tyrosine kinase catalytic domain signature 602 620 IPR001245 GO:0004672|GO:0006468
Aed6g2311 767 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 27 765 - -
Aed6g2311 767 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 765 - -
Aed6g2311 767 SMART serkin_6 489 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2311 767 Pfam PAS fold 113 220 IPR013767 GO:0006355
Aed6g2311 767 Pfam Protein tyrosine and serine/threonine kinase 489 741 IPR001245 GO:0004672|GO:0006468
Aed6g2311 767 ProSiteProfiles PAS repeat profile. 110 181 IPR000014 -
Aed6g2311 767 MobiDBLite consensus disorder prediction 31 105 - -
Aed6g2311 767 MobiDBLite consensus disorder prediction 320 369 - -
Aed6g2311 767 CDD STKc_MAP3K-like 495 741 - -
Aed6g2311 767 CDD PAS 121 222 IPR000014 -
Aed6g2311 767 MobiDBLite consensus disorder prediction 389 449 - -
Aed6g2311 767 Gene3D Transferase(Phosphotransferase) domain 1 567 767 - -
Aed6g2311 767 Coils Coil 6 33 - -
Aed6g2311 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2311 Aed-Chr6 25095801 25102146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2311 1 763 MAP Kinase Kinase Kinase AT3G06620 58.899 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aed6g2311 PK_Tyr_Ser-Thr 8.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2311 - - gmx:100800867 1412.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2311 6 25095801 25102146 Aed6g2311 6 25095801 25102146 ECH