Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2303 ATGACTTATATTAAAGATACATTTAAAGCTGATGAAATGGGAAAAAAAAAAAATTGTCCCCAAGACAGGAAAACGAAAGTGAAGAATGTGGTTTGTCCGAAGCCAACTATCAATTTTGGTTGTTTTTTGAAAAGAGAAAAGGAGAAAAGGGAAGGCATTGAAAATAACATCAGCAAACAGAGTCTTCCCCACACCATCCTCTCCCCACAAGAGAATGAGCCCGTTCATGTTCCTCTACCACCGAACACACCCCGCCACCACCTCACTCTGCTAACGTGCGCCCCTTCCTTATCCTGCGCCTCGGGGTCCCCTTTTTCTTTCTTCATAAGCTCCGCGTTAGCCGTTCTCTCTCTTTCTCTCTCAGATCGGAGCGAGGTTGGCGGTTCCGACGTTGGGGGCGTTAGGGTTAGGGTTTCCGAGAGATGTGGTATGCTCCAGGCATTGATGAATCTGTTCTCGCTGTGTTGGAAGCCGTTTGGCCGCGATGCTGATGATCGTATCGATTCAATCGGAGTTGTCGGAAGAGAAGGCAAAGATGGCTTGCTCTGGTTCCGCGACGTCGGAAAATATGGCTCCGGTGATTTCTCCATGGCCGTCGTTCAGGCCAACCAGGTCCTCGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTCGGCACCTTCGTCGGCATATACGACGGTCACGGAGGTCCCGACGCCGCCAGATACGTTTGCGATCACTTGTTTCGCCATTTTCAAGCAATATCGGCCGAGTCATGCGGGGTTGTGACATCTGAGACAATCCAAAGGGCGTTTCTCCAAACAGAAGAGGGGTACACGGCCCTCGTGTCAGGCTTGTGGAATGCTCGACCTCAAATTGCAAGTGCTGGGACCTGTTGTCTAGTTGGAGTGATATTTCAGCAGACACTCTTTGTGGCTAACGCTGGAGATTCCCGTGTTGTATTGGGTAAGAAAGTTGGCAACACTGGAGGTATGGCTGCAATTCAGCTGTCTACAGAACACAATGCAAATCTCGAGGCTGTTAGACAGGAACTTAAAGAATTACACCCGCATGATCCCCATATTGTTGTTCTCAAACATGGAGTTTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACTTATATTTGAAACATGCGCAGTTTAACCGGGAACCACTTAATGCAAAATTCAGACTTCCTGAACCGATGCACATGCCTATCTTGAGTGCTAATCCCAGTATTCTTTGTCATGCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCTGATGGCTTATGGGAGCACTTGAGTAATGAAAAAGCTGTGGATATTGTAAACAGCAATCCACATGCGGGTAGTGCGAAGAGACTTATAAAGGCTGCTCTCCACGAAGCAGCAAGAAAACGAGAAATGCGATATTCAGACCTCCGTAAGATAGACAAGAAGGTTCGACGCCATTTTCATGATGATATATCTGTAATTGTTTTATTCTTAAATCACGACCTTATTTCCAGAGGCACAGTGCTTGACTCGCCGTCACTTTCAATTCGAAGCGCCCTCGATCACTGA 1560 0.4699 MTYIKDTFKADEMGKKKNCPQDRKTKVKNVVCPKPTINFGCFLKREKEKREGIENNISKQSLPHTILSPQENEPVHVPLPPNTPRHHLTLLTCAPSLSCASGSPFSFFISSALAVLSLSLSDRSEVGGSDVGGVRVRVSERCGMLQALMNLFSLCWKPFGRDADDRIDSIGVVGREGKDGLLWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDAARYVCDHLFRHFQAISAESCGVVTSETIQRAFLQTEEGYTALVSGLWNARPQIASAGTCCLVGVIFQQTLFVANAGDSRVVLGKKVGNTGGMAAIQLSTEHNANLEAVRQELKELHPHDPHIVVLKHGVWRVKGIIQVSRSIGDLYLKHAQFNREPLNAKFRLPEPMHMPILSANPSILCHALQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHAGSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISRGTVLDSPSLSIRSALDH 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2303 519 CDD PP2Cc 195 495 IPR001932 -
Aed6g2303 519 ProSitePatterns PPM-type phosphatase domain signature. 220 228 IPR000222 GO:0043169
Aed6g2303 519 SMART PP2C_4 181 493 IPR001932 -
Aed6g2303 519 ProSiteProfiles PPM-type phosphatase domain profile. 194 495 IPR001932 -
Aed6g2303 519 Gene3D - 186 503 IPR036457 -
Aed6g2303 519 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 146 519 - -
Aed6g2303 519 Pfam Protein phosphatase 2C 218 465 IPR001932 -
Aed6g2303 519 SUPERFAMILY PP2C-like 204 496 IPR036457 -
Aed6g2303 519 PANTHER ALPHABET, ISOFORM E-RELATED 146 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2303 Aed-Chr6 25060135 25063871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2303 144 516 PP2C-type Phosphatase Gene Family AT4G38520 58.115 3.69e-157 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2303 K01102 - gmx:100811922 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2303 6 25060135 25063871 Aed6g2303 6 25060135 25063871 ECH