Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2298 ATGATCTCCAACCCGGTTCCGAACACGGACCGGTCACGTGACGCCAAGACACGGAGGAAGAAGAAAGCGCAGCTGAGCCTGAGACAACAACAACAGCAACAAGAGGATCAGAACCGGCCAAAGTGGAAATCCCAAGCGCAGCAACAAATCTACTCGTCCAAGCTGCGCCAAGCCTTAGCCAGAGTCAACCTCGGCTCGCCGCCACGCCGAGGCAAAGCCGTGCGCGACGCCGCCGACAGAGCCCTAGCCGTGACGGCCAAGGGGAGGACGCGCTGGAGCCGAGCCATCCTCACCAATCGGCTCAAGCTCAAGCTCAAGTTCACAAAACACAAGCGACAGAGAGTTACAATAACAACCGCCCCAAGCCGGTCAAAGAAACCACGGGTCAGCGTTTACCGGCTGAAGGGGAAGAGTTCACCGGGTGTGCAGAGAAAAGTGAGGTTCCTGGGACGATTGGTTCCTGGTTGCCGAAAAGAACAGTTGCCGGTTATTTTGGAAGAAGCCATTGATTACATACCCGCGCTTGAGATGCAGGTTCGAGCCATGAGCGCTCTCTTTAACCTTCTCTCTGGTTCTGCTTCTGCTTCTTCTTCCGGCGCCGCCGACTCTACTTCCGCGCCACCTGGCTCGTAA 633 0.5671 MISNPVPNTDRSRDAKTRRKKKAQLSLRQQQQQQEDQNRPKWKSQAQQQIYSSKLRQALARVNLGSPPRRGKAVRDAADRALAVTAKGRTRWSRAILTNRLKLKLKFTKHKRQRVTITTAPSRSKKPRVSVYRLKGKSSPGVQRKVRFLGRLVPGCRKEQLPVILEEAIDYIPALEMQVRAMSALFNLLSGSASASSSGAADSTSAPPGS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2298 210 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 5 206 - -
Aed6g2298 210 Coils Coil 13 33 - -
Aed6g2298 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 192 IPR036638 GO:0046983
Aed6g2298 210 MobiDBLite consensus disorder prediction 26 47 - -
Aed6g2298 210 MobiDBLite consensus disorder prediction 1 47 - -
Aed6g2298 210 CDD bHLH_AtIBH1_like 133 185 IPR044549 GO:0006355
Aed6g2298 210 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 206 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2298 Aed-Chr6 25023551 25024183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2298 41 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 57.803 4.43e-49 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2298 - - gmx:100803765 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2298 6 25023551 25024183 Aed6g2298 6 25023551 25024183 ECH