Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2282 TCAAACAGCTTATGGTGGAGTCTTGTGGGCAAGGCCAGTTCCAAGTGTACCATTGGCCTTTTCAAACACTTCCACACAACTATAAGAGTAATCAACTCAGTTATTTGGCCAAAGAGGTCCATTTTAGTAGCATTTATGAATATGAAAATGAATGTTATTCTGTGTCTCCTGGTCCTATGTTTCTTTCTTTTAAGTACTTCTTGGTTCATTAAAGCATCTGCAATAAATGTGGAAAACTATGAATCTGATAGAATAATCAACCTTCCTGGCCAACCTTCAAGCCCCTCAGTATCACACTTTTCAGGTTACATCACTGTCAATGAAAACCATGGGAGGGACCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAACCCTCCAAGAAGCCTCTCCTCCTCTGGCTCAATGGAGGACCTGGATGCTCCTCTATTGGGTATGGTGCAGTTGTTGAGATTGGACCTCTTATAGTCAACAAAAATGGGGAAGGACTACATTTCAACACATATTCCTGGAATCAAGAAGCAAATTTGCTATTTGTGGAGTCCCCTGTCGGAGTTGGATTTTCTTATACTAACACATCTTCTGATCTCACCATATTAGAGGATAATTTTGTGGCTGAGGATACCTACAATTTCTTGGTGAATTGGCTACAAAGATTCCCACAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGCTATGGTGGTCACTACATCCCTCAGCTTGCAGAGTTAATCTTTGATCGAAACAAAGATGGGAACAAATACCACTTTATTAATCTTAAAGGTTTTATTGTGGGAAACCCAGAGACTGATGATTACTATGACTATAAAGGCCTTCTGGAATATGCATGGAGCCACGCCGTTATATCAGACCAGCAATACGACAAAGCAAAACAAGTATGTGATTTTAAACAAGTTGAATGGTCTAATGAATGCAACAAGGCCATGAACGAAGTCTTCCAAGATTACTCAGAAATTGACATATACAACATTTATGCCCCGGCATGTCTTCTAAACAGCACATCCTCAGTATCTGATGATGGTAACAATAACAGCCCTGAATCATTGACTAAGGAGAGAAATGATTATAGAGTAAAGAGGATGAGAATTTTTGGGGGCTATGACCCTTGTTATTCCAATTATGCAGAAGAATACTTCAATAGAAAAGATGTTCAGTCATCTTTTCATGCAGATACTAGAAGAGCATGGAAGGTTTGCAATGGAGACGCAGATGGGAGAGTGCCAGTGATAGGGACCCGATATTGCGTTGAGGCACTAGGGTTACCTCTCAAATCTAGGTGGAGGACTTGGTACCATGATAATCAGGTTGGAGGAAGGATAGTTGAATATGAAGGGCTAACATACGTGACAGTGAGAGGAGCTGGTCACTTGGTACCACTTAACAAGCCCAATGAGTCTCTCTCCTTAATTCATTCTTTCTTAACAGGCCAACATCTTCCAACTCGTGGATAA 1476 0.4058 SNSLWWSLVGKASSKCTIGLFKHFHTTIRVINSVIWPKRSILVAFMNMKMNVILCLLVLCFFLLSTSWFIKASAINVENYESDRIINLPGQPSSPSVSHFSGYITVNENHGRDLFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGAVVEIGPLIVNKNGEGLHFNTYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDNFVAEDTYNFLVNWLQRFPQFKSRDFFISGESYGGHYIPQLAELIFDRNKDGNKYHFINLKGFIVGNPETDDYYDYKGLLEYAWSHAVISDQQYDKAKQVCDFKQVEWSNECNKAMNEVFQDYSEIDIYNIYAPACLLNSTSSVSDDGNNNSPESLTKERNDYRVKRMRIFGGYDPCYSNYAEEYFNRKDVQSSFHADTRRAWKVCNGDADGRVPVIGTRYCVEALGLPLKSRWRTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPNESLSLIHSFLTGQHLPTRG 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2282 491 ProSitePatterns Serine carboxypeptidases, histidine active site. 454 471 IPR033124 GO:0004185
Aed6g2282 491 SUPERFAMILY alpha/beta-Hydrolases 81 488 IPR029058 -
Aed6g2282 491 Gene3D - 409 487 - -
Aed6g2282 491 Gene3D alpha/beta hydrolase 79 339 IPR029058 -
Aed6g2282 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 403 489 IPR001563 GO:0004185|GO:0006508
Aed6g2282 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 57 407 IPR001563 GO:0004185|GO:0006508
Aed6g2282 491 Pfam Serine carboxypeptidase 89 408 IPR001563 GO:0004185|GO:0006508
Aed6g2282 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 178 IPR001563 GO:0004185|GO:0006508
Aed6g2282 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 215 240 IPR001563 GO:0004185|GO:0006508
Aed6g2282 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 189 IPR001563 GO:0004185|GO:0006508
Aed6g2282 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 454 467 IPR001563 GO:0004185|GO:0006508
Aed6g2282 491 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 403 489 - -
Aed6g2282 491 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 57 407 - -
Aed6g2282 491 ProSitePatterns Serine carboxypeptidases, serine active site. 229 236 IPR018202 GO:0004185
Aed6g2282 491 Gene3D - 378 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2282 Aed-Chr6 24916865 24920477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2282 406 487 Calmodulin-binding Proteins AT2G22960 33.735 2.74e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2282 K16297 - gmx:100792930 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2282 6 24916865 24920477 Aed6g2282 6 24916865 24920477 ECH