Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2253 ATGGGAACTCAATGCCAACTTCTAAACTCGTATCTCAACCACCCTCGTTCAACTCCTACCTCTCTGCTCTCTTCTACTCTACCACATAAGGTACTAATTCTAGGTTTGTTGTGCAGTTTTGAAAGCATTAAGATGGCAGAGACATTCCTATACACCTCAGAGTCGGTGAACGAGGGACACCCCGACAAGCTCTGCGACCAAATCTCCGACGCTGTCCTGGACGCTTGCCTCGAACAGGACACAGACAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACTTGGTCATGGTCTTCGGAGAGATCACCACCAAGGCCAACATTGACTACGAAAAGATCGTCCGTGACACCTGCAGGAACATCGGCTTCGTCTCAGACGATGTGGGACTTGACGCCGACAACTGCAGGGTCCTCGTAAACATTGAGCAGCAGAGCCCCGATATTGCTCAGGGTGTGCATGGCCACCTCACCAAAAGGCCTGAAGAAATTGGCGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACTGATGAAACCCCGGAATTGATGCCATTGAGCCATGTCCTTGCCACCAAGCTCGGTGCTCGCCTCACCGAGGTTCGCAAGGACGTTACCACCCAACTACCCCTTTTCCGTATAAATGGCAACTCAATGCACACTTTTGAACTCGCAGCGGTTGAGACAAACCAAGCCTCACTCCTCGTTCATATCATCCTCTCTCTTCTCTGCTCTGCTACCTTTCAAGAGTCAGTGAACGAGGGACACCCTGACAAGCTCTGCGACCAAATCTCCGATGCTGTCCTGGACGCTTGCCTTGAGCAGGACCCAGACAGCAAGGTTGCCTGCGAGACATGCACCAAGACCAACTTGGTCATGGTGTTCGGAGAGATCACCACCAAGGCCAACATTGACTACGAGAAGATCGTCCGTGACACCTGCAGGAACATCGGTTTTGTCTCAGACGATGTGGGACTTGACGCCGACAATTGCAAGGTCCTTGTGAACATTGAGCAGCAGAGCCCTGATATTGCTCAGGGTGTGCACGGCCACCTTACCAAAAGACCAGAGGAAATTGGTGCTGGAGACCAGGGTCACATGTTTGGCTATGCTACCGATGAAACCCCAGAATTGATGCCATTGAGCCATGTCCTTGCCACCAAGCTCGGTGCTCGTCTCACCGAGGTTCGCAAGGACAGTACCTGCCCTTGGTTGAGGCCAGATGGGAAGACCCAAGTGACTGTTGAGTATTACAATGACAATGGTGCCATGGTTCCAGTTCACGAGGACAACGACAACTTGATTGGGTACTGTGTCAGTGTTCAGTGA 1326 0.5204 MGTQCQLLNSYLNHPRSTPTSLLSSTLPHKVLILGLLCSFESIKMAETFLYTSESVNEGHPDKLCDQISDAVLDACLEQDTDSKVACETCTKTNLVMVFGEITTKANIDYEKIVRDTCRNIGFVSDDVGLDADNCRVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDVTTQLPLFRINGNSMHTFELAAVETNQASLLVHIILSLLCSATFQESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNLVMVFGEITTKANIDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDSTCPWLRPDGKTQVTVEYYNDNGAMVPVHEDNDNLIGYCVSVQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2253 441 ProSitePatterns S-adenosylmethionine synthase signature 1. 359 369 IPR022631 GO:0004478|GO:0006556
Aed6g2253 441 SUPERFAMILY S-adenosylmethionine synthetase 160 224 IPR022636 GO:0004478|GO:0006556
Aed6g2253 441 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 248 427 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aed6g2253 441 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 45 239 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aed6g2253 441 Pfam S-adenosylmethionine synthetase, central domain 357 426 IPR022629 GO:0004478|GO:0006556
Aed6g2253 441 Pfam S-adenosylmethionine synthetase, central domain 162 273 IPR022629 GO:0004478|GO:0006556
Aed6g2253 441 Gene3D - 58 157 - -
Aed6g2253 441 Gene3D - 254 349 - -
Aed6g2253 441 SUPERFAMILY S-adenosylmethionine synthetase 248 349 IPR022636 GO:0004478|GO:0006556
Aed6g2253 441 Gene3D - 350 430 - -
Aed6g2253 441 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 248 427 - -
Aed6g2253 441 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 45 239 - -
Aed6g2253 441 Pfam S-adenosylmethionine synthetase, N-terminal domain 248 341 IPR022628 GO:0004478|GO:0006556
Aed6g2253 441 Pfam S-adenosylmethionine synthetase, N-terminal domain 49 146 IPR022628 GO:0004478|GO:0006556
Aed6g2253 441 Gene3D - 162 253 - -
Aed6g2253 441 SUPERFAMILY S-adenosylmethionine synthetase 48 154 IPR022636 GO:0004478|GO:0006556
Aed6g2253 441 SUPERFAMILY S-adenosylmethionine synthetase 355 427 IPR022636 GO:0004478|GO:0006556
Aed6g2253 441 ProSitePatterns S-adenosylmethionine synthase signature 1. 164 174 IPR022631 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2253 Aed-Chr6 24627674 24633715 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2253 K00789 - gmx:100787994 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2253 6 24627674 24633715 Aed6g2253 6 24627674 24633715 ECH
Aed6g2253 6 24627674 24633715 Aed2g2313 2 26506521 26510248 ECH
Aed6g2253 6 24627674 24633715 Aed8g1551 8 20794524 20795884 ECH