Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2245 ATGGGATGGGATGGGACCACAAAAGCAAATCAATCACTGCAACTATATCACCTACCACTGATAATTCCATGCCTTGTTATTAACCCAACCACACCATTTGCCTCTTCTCACAATTTCATTTCATGTGCCTCCTGTGTTCTCCACTTCCCTCCAACAACTTCACAACGCAGAAGGGTCGGTGCCTTGCCTTTACCTTTACCTTCTCTTTCTGTTTGTAAAGTCAGTGTGAGGAGGGGAGGGGAATGGTGCTGCTCTGAAAAAGATATATATTGGCAGCAGCAAATGACATCTGATCTAAATTCGGGGTTGTCCAAGGAAACGTCTGTTTTTGGGTTGAAAGCATGGGAATTGATGGGGATAATAGTTGGGTTGTTCATTATAATCATTCTCGTGGTGATATCAATATGTCTTACTTCAAGAAAGAAATCTAGAAGAGTCAATGGCATGCTTCCCCTTGGTCATATGTTATCTGTTTCAGATGAGATCAAGGAAATTAGAGTTGATCAAGTTTCATCCAATAATCATCCTCAGAATGGAGCTTTTGTGAGTCTGTATGACAGGTTTAGTGACAGGGACTCTGAAAAGGGTTTGATCCAAACAAATAATGGGGATAATAGCAGTCAATCAGGCTCATTTGTTCATCTAAAGAAAGATGATGGCTCTCAATCAGGTGAAGAAAGTGGTGCTAAGTCTGTTTCTACGTACAGGTCTTCTTCGCATCCTATAACTGCACCATCCCCCTTGTGTGGTCTGCCTGAATTCTCTCACCTTGGCTGGGGACACTGGTTTACATTGAGGGATCTAGAACTTGCAACAAACAGGTTTTCGAAAGACAATGTTATTGGTGAAGGTGGATATGGTGTTGTTTATCAGGGCCAGCTAATCAATGGGAGACAAGCTGAAAAGGAATTTAGAGTGGAAGTTGAGGCTATCGGCCATGTGAGACACAAGAATTTGGTTAGACTTTTGGGCTATTGCATTGAAGGCACTCACAGATTGCTGGTTTATGAGTATGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAGTTTGGTTTTCTTACTTGGGAAGCTCGGATTAAAATTCTTCTTGGAACAGCAAAAGCGATCGAAGACGCCGAAAGAGTCAAGCAGGAAATATGGAGCTGGAGGTCCAGAAGGAGACTTCTGACACAGAGAAGACTGACAATCCAGATTCTAAGTCCAATGGCAGAAGGAGCCAAAGGAAGTAGAGCCATGAATGAATCTCAAAGCTAA 1269 0.4263 MGWDGTTKANQSLQLYHLPLIIPCLVINPTTPFASSHNFISCASCVLHFPPTTSQRRRVGALPLPLPSLSVCKVSVRRGGEWCCSEKDIYWQQQMTSDLNSGLSKETSVFGLKAWELMGIIVGLFIIIILVVISICLTSRKKSRRVNGMLPLGHMLSVSDEIKEIRVDQVSSNNHPQNGAFVSLYDRFSDRDSEKGLIQTNNGDNSSQSGSFVHLKKDDGSQSGEESGAKSVSTYRSSSHPITAPSPLCGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYQGQLINGRQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQFGFLTWEARIKILLGTAKAIEDAERVKQEIWSWRSRRRLLTQRRLTIQILSPMAEGAKGSRAMNESQS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2245 422 ProSiteProfiles Protein kinase domain profile. 275 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2245 422 SUPERFAMILY Protein kinase-like (PK-like) 254 376 IPR011009 -
Aed6g2245 422 MobiDBLite consensus disorder prediction 195 216 - -
Aed6g2245 422 PANTHER RECEPTOR-LIKE KINASE PLANT 96 374 - -
Aed6g2245 422 SMART tyrkin_6 275 417 IPR020635 GO:0004713|GO:0006468
Aed6g2245 422 MobiDBLite consensus disorder prediction 195 238 - -
Aed6g2245 422 PANTHER OS01G0323000 PROTEIN 96 374 - -
Aed6g2245 422 Gene3D Transferase(Phosphotransferase) domain 1 265 385 - -
Aed6g2245 422 Pfam Protein tyrosine and serine/threonine kinase 298 375 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2245 Aed-Chr6 24555824 24561960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2245 117 374 Trihelix Transcription Factor Family AT1G23540 31.655 2.71e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aed6g2245 PK_Tyr_Ser-Thr 2.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2245 - - gmx:100793499 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2245 6 24555824 24561960 Aed6g2245 6 24555824 24561960 ECH