Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2239 ATGGTGATTATAAACCTTGGGGAGAAGAAGAAGAAGAATACTGAAGGAATGCAACTTGGGAAATACGAGTTGGGTAGGACTCTCGGTGAGGGCAATTTTGGCAAAGTTAAGTTCGCTAGGAACACTGATTCTGGCCATGCTTTTGCTGTTAAGATCATTCAGAAGAACAAGATCATCGATCTCAACATCACCAATCAGATAAAGAGGGAAATAGCCACCTTAAAACTCCTCAGACATCCCAACGTTGTTAGATTATACGAGGTCTTGGCTAGCAAATCAAAAATTTATATGGTACTTGAGTACGTGAATGGAGGAGAGTTATTTCACATCATTGCAGATGGATTGTTGCATACAACTTGTGGAAGTCCCAATTATGTTGCACCAGAGGTTATTGCTAATAAGGGCTATGATGGTGCAACATCAGATGCATGGTCATGTGGTGTTATATTGTATGTAATCCTAACTGGATTGCTACCTTTTGATGATAGAAATCTTGTAGTTCTCTATCAGAAGATTTTTAAAGGAGATGTTCAGATACCAAAATGGTTATCACCGGGTGCACGAAATATGATAAGGAGAATTCTTGATCCTAACCCCGAAACACGGATAACAATGGCTGGGATCAAAGAAGATCCATGGTTCAAGAAGGGTTATATTCCAGCAAATCCTGAGGATGAAGATGTATATGCTGACCAAGAAGAGCCAGAAGAGCCAAATGAAGCAGAACAGAGGAATTCAAGATCACCAACCCTTATCAACGCATTTCAGTTGATAGGGATGTCTTCATGTCTAGACCTCTCTGGCTTTTTTGAGAAAGAGGATATCTCTGAGAGAAAGATAAGATTTACGTCAAACCTTTCGGTTAAAGACCTGATAGAGAGAATTGAGGACACTGTGACAGAAATGGAATTTAGAGTCCAGAAGAAAAATGGCAAATTGAAAGTGATGCGGGAGAACAAGGTGCACAAAAGTCTTGGCTGTCTCTCAGTGACAGTAGAGGTGTTTGAAATAAGCCCATCATGGTATGTAGTAGAATTAAGGAAGTCTTATGGAGATGGTTCTGTATACAAACAGCTATGCAATAAATTATTGAATGATTTGAGTGTTCCCCCCAAGCAGCAAGCACTAGTGAGATCAGCAGCAGCAAATTAG 1152 0.4002 MVIINLGEKKKKNTEGMQLGKYELGRTLGEGNFGKVKFARNTDSGHAFAVKIIQKNKIIDLNITNQIKREIATLKLLRHPNVVRLYEVLASKSKIYMVLEYVNGGELFHIIADGLLHTTCGSPNYVAPEVIANKGYDGATSDAWSCGVILYVILTGLLPFDDRNLVVLYQKIFKGDVQIPKWLSPGARNMIRRILDPNPETRITMAGIKEDPWFKKGYIPANPEDEDVYADQEEPEEPNEAEQRNSRSPTLINAFQLIGMSSCLDLSGFFEKEDISERKIRFTSNLSVKDLIERIEDTVTEMEFRVQKKNGKLKVMRENKVHKSLGCLSVTVEVFEISPSWYVVELRKSYGDGSVYKQLCNKLLNDLSVPPKQQALVRSAAAN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2239 383 ProSiteProfiles Protein kinase domain profile. 22 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2239 383 ProSiteProfiles NAF domain profile. 247 271 IPR018451 GO:0007165
Aed6g2239 383 PANTHER SERINE/THREONINE KINASE 113 375 - -
Aed6g2239 383 PANTHER SERINE/THREONINE KINASE 14 112 - -
Aed6g2239 383 Gene3D Transferase(Phosphotransferase) domain 1 112 253 - -
Aed6g2239 383 Gene3D Phosphorylase Kinase; domain 1 6 101 - -
Aed6g2239 383 Gene3D Kinase associated domain 1, KA1 254 369 - -
Aed6g2239 383 Pfam Protein kinase domain 116 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2239 383 Pfam Protein kinase domain 22 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2239 383 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 113 375 - -
Aed6g2239 383 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 112 - -
Aed6g2239 383 CDD CIPK_C 253 364 - -
Aed6g2239 383 Pfam NAF domain 249 308 IPR004041 GO:0007165
Aed6g2239 383 SUPERFAMILY Protein kinase-like (PK-like) 18 227 IPR011009 -
Aed6g2239 383 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Aed6g2239 383 MobiDBLite consensus disorder prediction 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2239 Aed-Chr6 24525846 24530064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2239 109 377 CBL-interacting serine-threonine protein kinases AT3G17510 64.234 2.90e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed6g2239 Pkinase 3.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2239 K07198 - gmx:100777468 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2239 6 24525846 24530064 Aed6g2239 6 24525846 24530064 ECH