Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2230 ATGGTTGGTGAGCATGGAACTCAGCTCTCTGGGGGTCAAAAGCAAAGAGTAGCAATAGCAAGAGCAATTTTGAAAGACCCAAGAATTCTACTTCTGGATGAAGCTACAAGTGCCCTTGATGCCGAATCTGAGAAAATTGTACAGGAGGCACTGGACAGAATAATGATAAACCGAACAACTGTGATTGTAGCTCATCGCTTAAGTACTATAAGGAATGCTGATAACATTGCTGTTATTCATCAAGGAAAAATAGTTGAAAGAGGTTCACATGCTGAGCTCACCAAGGATCCTAATGGAGCCTATAGCCAGCTCATTAGACTGCAAGAAATTAAAGGGTCAGAACAAGATGCTGCAGATGACACAGAGAAGCTAGAAAGTATAGTGCATTCTGGAAGACAATCAAGCCAAAGGTCATCAGAAGTTGGAAGCAGTACTGGTCGTAACTCATTCTCAGAATCACATGGTGAACCTGCAGGCGGCAGACCTGAAGCTCAAGCTCCTCCTTCAACAGTTTCTTCATCACCGGAAGTGCCACTTTATCGCCTGGCATATTTAAACAGGCCCGAGATTCCAGTGTTACTGATAGGGATTATAGCTGCAGTAGTAACTGGATTCTACCTTTTTGGCATTGCTGGTGGTAAGTTAATCAAAAGGATCCGGAAAATGTGTTTTGAGAAAGTAGTTCACATGGAAGTTAGTTGGTTCGATGAAGCTAAACATTCAAGCGGAGCAATTGGAGCAAGGCTCTCTTCTGATGCAGCTGCTGTTCGAGCTTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATATTGCTACAGCAGTAGCTGGCTTGGTAATTGCTTTTGAAGCAAGCTGGCAGCTTGCTCTTATAGTTCTTGCTTTGGCACCTCTATTAACACTAAATGGATACGTGCAATTCAAGTTCTTGAAAGGATTCAGCGCAGATGCAAAGAAAGTGTATGAGGAAGCAAGTCAAGTGGCGAATGATGCTGTAGGGAGCATAAGAACAGTTGCTTCTTTCTGTGCTGAAAAGAAGGTGATGGAATTATACCAGGAAAAATGTGAAGGGCCAATTAGGAAAGGCATAAGGCGAGGAATAATAAGCGGAATTAGTTTTGGGGTATCACTATTCATGGTGTATGCAGTTTATGCATGCAGTTTTTATGTTGGAGCTCGACTTGTAGAGGATGGAAAAGCAACATTCTCAGATGTTTTCCGTGTCTTTTTTGCTCTAAGCATGGCAGCTATGGGAATCTCTCAATCTGGATCTTTGGTCTCTGATTCAACTAAGTCAAAAATTGCTGCCGCTTCTGTATTTGCTATTCTTGATCGAAAGTCACAAATTGACCCAAGTGATGACTCTGGATTGACATTGGAAGAAGTCAAGGGAGTGATTGAATTTAACCATGTCAGTTTCAAGTATCCTACCAGACTCGACGTTCAAATATTCAGTGATCTTTGCTTGACCATTCTTAGTGGCAAGACAGTTGCACTGGTTGGAGAAAGTGGAAGTGGAAAATCAACGGTGATCTCATTGTTACAAAGATTTTATGATCCAGACTCGGGTCAGATTACACTGGATGGAACAGAAATCCAAGTGCTACAACTTAAATGGTTTAGGCAGCAGATGGGTCTGGTAAGCCAGGAGCCAGTGTTGTTTAATGACACAATCAGAGCCAATATTGCATATGGAAAGGGAGGTGATGCAACAGAAGCAGAAATTATAGCTGCAGCAGAACTGGCAAATGCTCACAACTTCACTTGTAGTTTGCAGGAGGGTTATGACACAATAGTTGGGGAGAGAGGGATTCAATTATCTGGGGGACAGAAGCAGCGTGTGGCAATTGCAAGAGCAATAGTGAAGAATCCAAAAATTTTACTATTAGATGAGGCCACAAGTGCACTTGATGCTGAGTCTGAAAAAGTGGTTCAGGATGCACTAGACCGTGTTATGGTGGACCGAACCACAATAGTAGTGGCTCATAGGCTATCAACTATAAAGGGTGTGGATTTAATTGCAGTAGTTAAAAATGGGGTCATAGCAGAGAAGGGAAAGCATCAAGCATTAATCAACAAAGGAGGTGACTATGCTTCCTTAGTAGCATTGCACACAATTTCTTCTTCTACATCTTAG 2136 0.4232 MVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESEKIVQEALDRIMINRTTVIVAHRLSTIRNADNIAVIHQGKIVERGSHAELTKDPNGAYSQLIRLQEIKGSEQDAADDTEKLESIVHSGRQSSQRSSEVGSSTGRNSFSESHGEPAGGRPEAQAPPSTVSSSPEVPLYRLAYLNRPEIPVLLIGIIAAVVTGFYLFGIAGGKLIKRIRKMCFEKVVHMEVSWFDEAKHSSGAIGARLSSDAAAVRALVGDALGLLVQNIATAVAGLVIAFEASWQLALIVLALAPLLTLNGYVQFKFLKGFSADAKKVYEEASQVANDAVGSIRTVASFCAEKKVMELYQEKCEGPIRKGIRRGIISGISFGVSLFMVYAVYACSFYVGARLVEDGKATFSDVFRVFFALSMAAMGISQSGSLVSDSTKSKIAAASVFAILDRKSQIDPSDDSGLTLEEVKGVIEFNHVSFKYPTRLDVQIFSDLCLTILSGKTVALVGESGSGKSTVISLLQRFYDPDSGQITLDGTEIQVLQLKWFRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHNFTCSLQEGYDTIVGERGIQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVDRTTIVVAHRLSTIKGVDLIAVVKNGVIAEKGKHQALINKGGDYASLVALHTISSSTS 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2230 711 SMART AAA_5 493 666 IPR003593 -
Aed6g2230 711 PANTHER - 1 204 - -
Aed6g2230 711 PANTHER - 206 707 - -
Aed6g2230 711 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 206 707 - -
Aed6g2230 711 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1 204 - -
Aed6g2230 711 ProSitePatterns ABC transporters family signature. 606 620 IPR017871 GO:0005524
Aed6g2230 711 Gene3D - 1 121 IPR027417 -
Aed6g2230 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 455 703 IPR027417 -
Aed6g2230 711 Gene3D ABC transporter type 1, transmembrane domain 122 205 IPR036640 GO:0005524|GO:0016021
Aed6g2230 711 MobiDBLite consensus disorder prediction 128 152 - -
Aed6g2230 711 Gene3D ABC transporter type 1, transmembrane domain 425 455 IPR036640 GO:0005524|GO:0016021
Aed6g2230 711 Pfam ABC transporter 486 634 IPR003439 GO:0005524
Aed6g2230 711 Pfam ABC transporter 3 37 IPR003439 GO:0005524
Aed6g2230 711 Gene3D - 456 705 IPR027417 -
Aed6g2230 711 CDD ABC_MTABC3_MDL1_MDL2 466 701 - -
Aed6g2230 711 Gene3D ABC transporter type 1, transmembrane domain 206 389 IPR036640 GO:0005524|GO:0016021
Aed6g2230 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 108 IPR027417 -
Aed6g2230 711 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 192 431 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed6g2230 711 MobiDBLite consensus disorder prediction 115 174 - -
Aed6g2230 711 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 466 703 IPR003439 GO:0005524
Aed6g2230 711 CDD ABC_6TM_Pgp_ABCB1_D2_like 192 449 - -
Aed6g2230 711 SUPERFAMILY ABC transporter transmembrane region 192 450 IPR036640 GO:0005524|GO:0016021
Aed6g2230 711 Pfam ABC transporter transmembrane region 194 416 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2230 Aed-Chr6 24461973 24465107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2230 211 711 Calmodulin-binding Proteins AT2G36910 42.147 1.96e-128 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2230 K05658 - gmx:100799760 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2230 6 24461973 24465107 Aed6g2230 6 24461973 24465107 ECH