Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2229 ATGGAGGCTGAGGCCAGCTTGGAAGGAGATATTATGACTTCAAATGAGATGAGAGGTGGATCAACAACTGATCATCCACCAACACCAGTTCAAGCTCCTGAAAATACCCAACAAATGAATGGCAGCAGGGAGCAGGATTCCAAGAAGAACAAAGTGAAGAAGGATGAAAGCAATAAAACAGTACCCTTTTACAAACTTTTCTCTTTTGCAGACTCTTGGGATTGTCTTCTGATGGTTGTTGGGGCAATAGGTGCTGTTGGCAACGGAATCTCTATGCCTTTATTGACCATACTTATTGGTGATGCCATTGATGCTTTTGGAGGAAATGTTGATAATAAACAAGCAGTAGTTCATCAAGTTTCCAAGGCATCTCTGAAGTTTGCATCCATAGGCACAGGTGCCTTTTTTGCAGCACTCTTGCAGGTGTCTTGTTGGGTGATCACTGGGGAGAGACAAGCTGCAAGAATAAGAGGGTTATACCTCAAAGCAATTTTGAGGCAAGATATCAGCTTCTTTGACAAGGAAACCAACAGTGGAGAGGTTGTTGGAAGGATGTCTGGTGACACAGTTCTTATTCAAGAAGCCATGGGAGAAAAGGTAGGAAAATTCGTACAGTATGTGGCATGTTTTTTTGGAGGTATAGTCATAGCATTCATCAAGGGTTGGCTTCTAAGCCTTGTTCTTCTGTCTTCTCTGCCGCTTCTTGTCCTCTCTGGTTCCATAATGAGCTTTGCTTTTGCAAAGATGGCATCCCGAGGACAAGCAGCTTATTCTGAAGCAGCAACTGTAGTGGATCGCACAATTGGTTCAATTCGAACTGTTGCATCATTTACTGGTGAGAAGCAAGCTATAGCTCAATACAATCAATACTTAACTAAAGCTTACAGAGTTGGAGTGCAAGAGGGTGTGGCTGGTGGCTTTGGCTTTGGTTTTGTTCGTCTATTTGTTTACTGTACCTATGGTCTGGCAGTATGGTTTGGAGGAAAGATGGTACTAGAGAAAGGTTACACAGGAGGACAAGTCATTAGTATATTTTTTGCAGTTTTGACTGGTTCCATGTCTCTGGGGCAGGCATCTCCAAGCTTAGCTGCATTTGCTGCAGGACAAGCTGCTGCCTTTAAAATGTTTGAAACAATAAAGAGGCATCCAGAAATTGATGCTTATGACTCTTCTGGTCTACAGATAGATGATATTTCTGGGGATATAGAACTTAGGGAGGTTTGCTTTAGTTATCCTTCAAGACCTGATGAACAGATATTCAATAGATTTTCAATTTCAATACCAAGTGGCACCACTGCAGCTTTGGTAGGGCAAAGTGGGAGTGGGAAGTCAACAGTTATTAGTTTGCTTGAGAGATTTTATGATCCCCAAGCTGGTGAAGTTCTCATTGACGGCATCAACCTCAGGGAATTTCGATTGAAATGGATCAGACAGAAAATAGGGCTTGTCAGCCAGGAGCCAGTTCTCTTTACTTGTAGTATTAAAGAGAACATTGCCTATGGTAAGGATGGGGCTACAGATGAAGAAATTAGAGCTGCAGCTGAACTTGCTAATGCTGCTAAGTTCATAGATAAATTCCCCCATGGACTTGACACGATGGTTGGCGAGCATGGAACTCAGCTCTCTGGAGGTCAAAAACAAAGAATATCAATAGCAAGAGCAATTCTGAAGGACCCAAGAATTCTGCTTCTTGATGAAGCTACAAGTGCCCTTGATGCAGAATCAGAGAGAGTGGTGCAAGAGACACTAGACAGAATTATGATAAACCGAACTACTGTCATTGTAGCACACCGCCTAAGCACAATAAGGAATGCTGATGTTATTGCAGTTATTCATCAAGGAAAAGTAATAGAAAAAGGAACACATGCTGAGCTCATTAAAGACCTTGATGGAGCTTTTAGCCAGCTCATTAGATTGCAAGAAATTAAAAGAGAATCAGAACAGCATGATGCAAATGACTCGGGCGGGCCAGAAAACTTTGTAGATTCTGAACGACAATTAAGTCAACGGCTTTCTTTCCCTCAATCTTTAAGTCGGGGATCATCTGGAAGAGGAAACAGCAGCCAACACTCATTCAAAATATCAAATGCCATGCCTACCTCACCAGATATCTTTGAAACATCAGAAGGAAGGCCTGGAGTTCTTTCTTCAGCAGCATCACATAATAAACCTCAAGAAGTTTCACTTCTACGCATTGCTTATCTTAACAAGCCTGAAATCCCTTTGTTAATCATGGGGACTGTGGCAGCAGCAGCAACTGGGGCAATACTACCCACCGTGGGGCTTCTTCTCTCCCACATGATAAATACTTTCTTCGAGCCTGCAGATGAACTCCGAAAAGACTCGAGGTTTTGGGCATTAATATTTGTTGTGCTTAGTGTGGTTGCCTTCGTATTTCTTCCATTAAGGTCCTACCTTTTTGCTGTAGCTGGTTCTAAGTTGATAAAAAGGATCCGGCTAATGTGTTTTGAGAAAGTAATACACATGGAAATAGGCTGGTTTGATAAAGCTGAGAATTCAAGTGGAGCACTTGGAGCAAGGCTCTCAACTGATGCGGCTTCTATTCGAACCTTGGTTGGGGATGCTCTTGGTTTGATGGTTCAAGATATTTCTACCGCAATTACAGCCTTGGTAATTGCCTTTGATGCAAACTGGCAGCTTTCTCTCATCGTTCTTGTTTTGGTACCTCTAATATTACTAAATGGACATTTGCAAATGAAGTCCATGCAAGGATTCAGCACCAATGCAAAGATTCTATATGAGGAAGCAAGTCAAGTAGCGAATGATGCAGTAGGGAATATCAGAACAGTTGCAGCTTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACCAGAAGAAATGTTTAGGACCAATTCAGACAGGTACAAGGCAAGGTTTAGTCAGCGGAACAGGTTTCGGGTTATCACTCTTTTTTCTGTTCTCTGTTTATGCATGTAGTTTTTATGCTGGGGCCAGACTTGTTGAGAGTGGCAAGACATCAATCTCTGATGTTTTCCGTGTATTTTTTGCTCTCTCTATGGCAGCTATAGCAATGTCACAATCTGGCTTTATGACCCCTGCTGCAAGTAAAGCAAAAAGTTCTGCTGCTTCTGTCTTTGCTATTCTTGATCAGAAATCAATAATAGATCCCAGTGATAAGTCTGGAATGACATTGGAAGAAGTGAACGGAGAGATCAGGTTCCACCATGTCACTTTCAAGTATCCAACAAGGCCTAATGTTCTTGTGTTCAAAGATCTTTCATTGAACATTCATGCAGGAGAGACAGTTGCTCTAGTAGGTGAAAGTGGAAGTGGAAAATCTACAGTGATCTCATTGTTACAAAGATTTTATGAGCCAGATTCAGGTCAGATTACACTGGATGGAACAGAAATCCAAAAGCTACAACTTAAATGGTTTAGACAGCAGATGGGTCTGGTAAGCCAGGAACCAGTGTTGTTTAATGACACCATCAGAGCCAATATCGCATATGGAAAAGGTGGTGATGCAACAGAGGCAGAAATTATAGCTGCAGCAGAACTGGCAAATGCCCACAACTTCATTAGCAGTTTGCAGCAGGGTTATGATACATTAGTAGGGGAGAGAGGGATTCAACTATCTGGAGGGCAGAAGCAGAGGGTGGCCATTGCAAGAGCCATAGTGAAGAGTCCAAAAATATTTCTGCTAGATGAAGCCACGAGTGCACTTGATGCTGAGTCTGAAAGAGTGGTTCAGGATGCACTTGACCGAGCGAGGGTGGATAGAACCACAATTGTGGTGGCTCACAGGTTATCCACCATAAAGGATGCAGATTCAATTGCAGTGGTTCAAAATGGAATCATTGCAGAGAAAGGAAAGCATGACACTTTGCTTAACAAAGGTGGTACATATGCTTCCTTAGTAGCACTGCACATTAGTAATGCTTCATCGTAG 3930 0.4234 MEAEASLEGDIMTSNEMRGGSTTDHPPTPVQAPENTQQMNGSREQDSKKNKVKKDESNKTVPFYKLFSFADSWDCLLMVVGAIGAVGNGISMPLLTILIGDAIDAFGGNVDNKQAVVHQVSKASLKFASIGTGAFFAALLQVSCWVITGERQAARIRGLYLKAILRQDISFFDKETNSGEVVGRMSGDTVLIQEAMGEKVGKFVQYVACFFGGIVIAFIKGWLLSLVLLSSLPLLVLSGSIMSFAFAKMASRGQAAYSEAATVVDRTIGSIRTVASFTGEKQAIAQYNQYLTKAYRVGVQEGVAGGFGFGFVRLFVYCTYGLAVWFGGKMVLEKGYTGGQVISIFFAVLTGSMSLGQASPSLAAFAAGQAAAFKMFETIKRHPEIDAYDSSGLQIDDISGDIELREVCFSYPSRPDEQIFNRFSISIPSGTTAALVGQSGSGKSTVISLLERFYDPQAGEVLIDGINLREFRLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAAELANAAKFIDKFPHGLDTMVGEHGTQLSGGQKQRISIARAILKDPRILLLDEATSALDAESERVVQETLDRIMINRTTVIVAHRLSTIRNADVIAVIHQGKVIEKGTHAELIKDLDGAFSQLIRLQEIKRESEQHDANDSGGPENFVDSERQLSQRLSFPQSLSRGSSGRGNSSQHSFKISNAMPTSPDIFETSEGRPGVLSSAASHNKPQEVSLLRIAYLNKPEIPLLIMGTVAAAATGAILPTVGLLLSHMINTFFEPADELRKDSRFWALIFVVLSVVAFVFLPLRSYLFAVAGSKLIKRIRLMCFEKVIHMEIGWFDKAENSSGALGARLSTDAASIRTLVGDALGLMVQDISTAITALVIAFDANWQLSLIVLVLVPLILLNGHLQMKSMQGFSTNAKILYEEASQVANDAVGNIRTVAAFCAEEKVMELYQKKCLGPIQTGTRQGLVSGTGFGLSLFFLFSVYACSFYAGARLVESGKTSISDVFRVFFALSMAAIAMSQSGFMTPAASKAKSSAASVFAILDQKSIIDPSDKSGMTLEEVNGEIRFHHVTFKYPTRPNVLVFKDLSLNIHAGETVALVGESGSGKSTVISLLQRFYEPDSGQITLDGTEIQKLQLKWFRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHNFISSLQQGYDTLVGERGIQLSGGQKQRVAIARAIVKSPKIFLLDEATSALDAESERVVQDALDRARVDRTTIVVAHRLSTIKDADSIAVVQNGIIAEKGKHDTLLNKGGTYASLVALHISNASS 1309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2229 1309 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 45 1305 - -
Aed6g2229 1309 Gene3D ABC transporter type 1, transmembrane domain 126 994 IPR036640 GO:0005524|GO:0016021
Aed6g2229 1309 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1065 1302 IPR003439 GO:0005524
Aed6g2229 1309 MobiDBLite consensus disorder prediction 671 719 - -
Aed6g2229 1309 CDD ABC_MTABC3_MDL1_MDL2 1065 1300 - -
Aed6g2229 1309 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 744 1030 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed6g2229 1309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 640 IPR027417 -
Aed6g2229 1309 SMART AAA_5 1092 1285 IPR003593 -
Aed6g2229 1309 SMART AAA_5 429 601 IPR003593 -
Aed6g2229 1309 ProSitePatterns ABC transporters family signature. 541 555 IPR017871 GO:0005524
Aed6g2229 1309 MobiDBLite consensus disorder prediction 671 703 - -
Aed6g2229 1309 SUPERFAMILY ABC transporter transmembrane region 732 1049 IPR036640 GO:0005524|GO:0016021
Aed6g2229 1309 Gene3D - 1055 1308 IPR027417 -
Aed6g2229 1309 PANTHER - 45 1305 - -
Aed6g2229 1309 Pfam ABC transporter transmembrane region 743 1013 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed6g2229 1309 Pfam ABC transporter transmembrane region 79 353 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed6g2229 1309 Gene3D - 400 653 IPR027417 -
Aed6g2229 1309 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 402 638 IPR003439 GO:0005524
Aed6g2229 1309 SUPERFAMILY ABC transporter transmembrane region 59 384 IPR036640 GO:0005524|GO:0016021
Aed6g2229 1309 CDD ABC_6TM_Pgp_ABCB1_D2_like 733 1048 - -
Aed6g2229 1309 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 79 367 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed6g2229 1309 CDD ABC_6TM_Pgp_ABCB1_D1_like 78 362 - -
Aed6g2229 1309 MobiDBLite consensus disorder prediction 15 43 - -
Aed6g2229 1309 CDD ABC_MTABC3_MDL1_MDL2 402 640 - -
Aed6g2229 1309 MobiDBLite consensus disorder prediction 1 54 - -
Aed6g2229 1309 Pfam ABC transporter 1084 1233 IPR003439 GO:0005524
Aed6g2229 1309 ProSitePatterns ABC transporters family signature. 1205 1219 IPR017871 GO:0005524
Aed6g2229 1309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1054 1302 IPR027417 -
Aed6g2229 1309 Pfam ABC transporter 421 569 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2229 Aed-Chr6 24453521 24458961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2229 59 1303 Calmodulin-binding Proteins AT2G36910 43.360 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2229 K05658 - gmx:100777713 2178.29