Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2220 ATGGATGGAAAAGTTGCATTGGAAGTTCAGAAAAAGGCATATGTTAATTATAACACTACAGATGCACTCAACTGGACTACCACTCAGGAACAACCCTCCATTATTCAAAATACTACTCTAGGATCTACTCTTCTCAGTTTGAGTTTGAATAACTTGGAGCCTCCACAAAATCATGAGCAACAGCCTCAGCTGAACCAATTGGGCTTGCTGCAAATTGAGATAGAGGAGGTGAAGAAGGAGAATCAAACTTTAAGGTTAATGCTAAATGAGTTCACTCAACACTACGCTTCTCTTCAGAATCAGTTATTGCTGGCGATTCAGCAGCACAAGAAACTATCTCGACATAATGAGGACATGCAGAAGGAGAGCAAGGAAAATGACTTGGAGAAACCGGCGTTACCCTCCTGCAGGCAGTTCTTAAATACTGGTAAAATGAATAATAACCAATTAGTAACATCACAAGAAGCAAAAATCATAGAAGAGCAAGCATTTGAGGCTTCTTGCAAGAAGGCTAGAGTGTCCGTAAGAGCACGATCAGAATCATCTTCGATGGGTGATGGGTGTCAATGGAGAAAATATGGACAAAAGATATCAAAGGGAAATCCTTGTCCACGGGCATACTATCGTTGCAACATGGGAACAGCATGTCCAGTTCGCAAACAGGTTCAAAGGTGTGTTGAGGATGAGAGTATTGTGATCACAACCTATGAAGGGATTCATAATCATTCACTTCCACCACCAGCCAGGTCCATGGCGTCCACAACATCAGCAGCACTCAGCACGTTCCTTTCCGGTTCAACCACTAGTACTTCACAATATGGAACCACTTATTCTTATCCATCTGCATCATCAACATGTCCTACTGTTACATTGGACTTAACCCACCCCAGCTCTATCAACAACCTTAAATTAATCCCAACAGGTGCAGCAGTAGAGAAAAGCCTTGGCTTGGTGGATGTTGTTAGTGCTGCCATAACCAAGGATCCTTTTCTTAAGGCAGCATTAGAAGCAGCCGTTTCCTCAATCATCATTGGAGAATAA 1041 0.4236 MDGKVALEVQKKAYVNYNTTDALNWTTTQEQPSIIQNTTLGSTLLSLSLNNLEPPQNHEQQPQLNQLGLLQIEIEEVKKENQTLRLMLNEFTQHYASLQNQLLLAIQQHKKLSRHNEDMQKESKENDLEKPALPSCRQFLNTGKMNNNQLVTSQEAKIIEEQAFEASCKKARVSVRARSESSSMGDGCQWRKYGQKISKGNPCPRAYYRCNMGTACPVRKQVQRCVEDESIVITTYEGIHNHSLPPPARSMASTTSAALSTFLSGSTTSTSQYGTTYSYPSASSTCPTVTLDLTHPSSINNLKLIPTGAAVEKSLGLVDVVSAAITKDPFLKAALEAAVSSIIIGE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2220 346 Gene3D WRKY domain 168 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g2220 346 ProSiteProfiles WRKY domain profile. 179 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g2220 346 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 17 343 IPR044810 GO:0003700
Aed6g2220 346 SMART WRKY_cls 184 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g2220 346 SUPERFAMILY WRKY DNA-binding domain 178 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g2220 346 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 17 343 - -
Aed6g2220 346 Coils Coil 67 94 - -
Aed6g2220 346 Pfam WRKY DNA -binding domain 186 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2220 Aed-Chr6 24397973 24402995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2220 156 294 WRKY Transcription Factor Family AT4G04450 60.000 2.70e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed6g2220 WRKY 5.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2220 - - gmx:100779314 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1028 4 9406026 9410685 Aed6g2220 6 24397973 24402995 PCT