Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2214 ATGTGCCAAAGAGGAAGCAAGAGTGGTGGAGGCATGAAGTTGCTTAGGGTGTTTGTGTTTGTGGGGTTGGTCATTGTGAAATGGGTGGAAGGCTTTGAGGATACTAATGTGACAGACCTAGACATGCAATATGTCAGTGGAAGAGGTTTCTACAGACCTTTGATGGTTGGTCTTACTCTTATTAATGGTGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTGCCGGGGTACCACTTCCACCGTGGATATGGTTCAGGATCAAACAGTTGGCTCATACAATTGGAGGGAGGAGGTTGGTGTGGAACTATAAAAAATTGTCTTTATAGTAAGAAAACACGTCATGGTTCATCATATTTTATGGAAAAACAAATACCATTTATTGGGATATTGAGCAACAAAGCTGAGGAGAATCCAGATTTTTTCAATTGGAATAGAATAAAAATCCGTTATTGCGACGGTGCTTCATTTAGTGGCAACAGTCAAAATGCGGGAGCAGGGTTGTATTTCAGAGGGCAACGCATTTGGCAAGCTGCTATGGAAGATTTAATGTCAAAAGGGATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCTACTATTATACATTGTGATGAATTTCGGGAATTGTTTCCTAGAACCACAAGAGTAAAATGCTTAAGTGATGCTGGATTATTCCTTGATTCTGTGGATGTTTCTGGTCGTCGCAGCTTAAGGAATTTGTTTGGAAGTGTGGTTGCCTTACAGGGAGTGCAAAGAAGTCTTCCAAGGAGTTGTACCAGTCGCCTCAATCCAATTTTGTGCTATTTTCCTCAGCACCTAATTGCCGGTGTCAGGACACCACTATTTCTTCTCAATGCAGCTTATGATACTTGGCAGGTTCAAGCCAGTCTTGCTCCACCATCTGCTGACTACCGTTGGAACTGGTATGAATGCAGAAAAAATTATGCACGTTGCAGTGCACCACAGATACAGTATCTTCAAGGTTTTCGAAATCAGATGCTTAGATCTACAAGAGCCTTCACACGGTCTCATAAAAATGGGATATTCATAAATTCATGTTTCGCCCATTGCCAATCAGAAAGACAGGATACATGGTTTGCTCGTGATTCCCCTCGTATTGGAAATAGAGGGATCGCAGAGTCTGTTGGGAACTGGTATTTTGACCGGGTTAGTGTCCAGGCTATTGGCTGTGCTTACCCTTGTGACAAAACCTGCCATAATTTGGTATTTAAGTGA 1260 0.4278 MCQRGSKSGGGMKLLRVFVFVGLVIVKWVEGFEDTNVTDLDMQYVSGRGFYRPLMVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIKNCLYSKKTRHGSSYFMEKQIPFIGILSNKAEENPDFFNWNRIKIRYCDGASFSGNSQNAGAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLATIIHCDEFRELFPRTTRVKCLSDAGLFLDSVDVSGRRSLRNLFGSVVALQGVQRSLPRSCTSRLNPILCYFPQHLIAGVRTPLFLLNAAYDTWQVQASLAPPSADYRWNWYECRKNYARCSAPQIQYLQGFRNQMLRSTRAFTRSHKNGIFINSCFAHCQSERQDTWFARDSPRIGNRGIAESVGNWYFDRVSVQAIGCAYPCDKTCHNLVFK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2214 419 Pfam Pectinacetylesterase 54 398 IPR004963 GO:0016787
Aed6g2214 419 PANTHER NOTUM-RELATED 18 418 IPR004963 GO:0016787
Aed6g2214 419 PANTHER PECTIN ACETYLESTERASE 18 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2214 Aed-Chr6 24344109 24350008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2214 26 419 Carbohydrate Esterase AT1G57590 65.482 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2214 K19882 - gmx:100791571 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2214 6 24344109 24350008 Aed6g2214 6 24344109 24350008 ECH
Aed6g2214 6 24344109 24350008 Aed2g2344 2 26712791 26719752 ECH
Aed6g2214 6 24344109 24350008 Aed8g1596 8 21118250 21122939 ECH