Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2205 ATGGCTGGTGTGAACCCCGAGGCAGGAGAGTGGAGGACTTATCCTTCTGTTATGGAGACTTCTCTTGATAGTGTTGATGGGTCGGTGATGCATTTCTCTGCTACAAGGCCAGTGGCAGTGCCATCATCTGGACAGAATAAAGTGATTCCTAGTCCAACTCAGTTTAGCATCCTCTATAAGGGGAAAATGTGTATCTATGAAGGAATTCCTGCAGAAAAGGTGCGCGAAATAATGTTGATTGCTTCTGTCTCTGCTAAGTCTGCTGAAATGAAGAGTGGTATCCCCTTGACTTCACTCATTCCCAAAAGCACTTCTTCTTCTTCACAGGGAAACTCTTCTACTAATTTGGCTTCACCCCAATCCGTCAAGAGTTCCATTCGCAGGCTGCAAGATGAATTTCCACTAGCCCGAAGGCAATCACTTCAAAGATTTCTTGAGAAGAGAAGAAACAGGTTGGCTAACAAATACCCTTATGCCTTAACAAAAAAAGTGGTTCACAACACAGACAACACGCCAGAATTTGGTTCCTTGATGAACTATTAG 543 0.4383 MAGVNPEAGEWRTYPSVMETSLDSVDGSVMHFSATRPVAVPSSGQNKVIPSPTQFSILYKGKMCIYEGIPAEKVREIMLIASVSAKSAEMKSGIPLTSLIPKSTSSSSQGNSSTNLASPQSVKSSIRRLQDEFPLARRQSLQRFLEKRRNRLANKYPYALTKKVVHNTDNTPEFGSLMNY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2205 180 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 173 IPR040390 -
Aed6g2205 180 ProSiteProfiles Tify domain profile. 48 83 IPR010399 -
Aed6g2205 180 Pfam Jas motif 134 158 IPR018467 -
Aed6g2205 180 PANTHER DIVERGENT CCT MOTIF PROTEIN 1 173 - -
Aed6g2205 180 Pfam tify domain 50 82 IPR010399 -
Aed6g2205 180 SMART tify_2 48 83 IPR010399 -
Aed6g2205 180 MobiDBLite consensus disorder prediction 101 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2205 Aed-Chr6 24299148 24302361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2205 52 158 Tify Gene Family AT5G20900 39.286 1.62e-20 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aed6g2205 tify 7.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2205 K13464 - gmx:100306655 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2205 6 24299148 24302361 Aed4g1018 4 9290898 9294677 PCT