Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2198 ATGGCTATTCCATCTCCTAAAATTTCCCTCCTTCTCATAACAGTACTCTTCTTCTCACATACTATAGCTACCACCAAGTCCTCCAATGCTTCCACAACATTGCATGCAGGCAGAACCAACCCATCTCCTAAAGTTAGCTTCAATTCATCTAAGCTTTCCATTTCAATAATCATAAATCCAAACATCATCAACAACCTTCTTCAGTCCCTCGAAGCAGCAATATCTGAAGCGACAAAACTATCTGATCTACTAAACAGTGCTGGTGGACACTCAAGCATCATAGAGAACAAAAAAGGAGCAGTTCAAGACTGTAGAGAACTTCAACAATCCACCTTAACTTCCTTAAAACGATCACTATCAGGAATCCGTTCCCAAGACTCAAGAAAGGTAATTGATGCAAGAACCTACCTCAGTGCAGCACTCACCAACAAGGACACGTGTCTAGAGAGCTTAGATTCTGCTTCGGGTACCCTTAAGCCGGTTCTAGTGAACTCTGTCATCAACTCTTACAAAGATGTCAGTGAGTCTCTCTCAATGCTTCCTAAGCTTCAGAGGAAGAAGGCTTCCAAAGGAAATAAGAACCGGCGTTTGTTGTGGTTGTTAAGGAAAAACCGTCGCCGCCACTTGCAAAGCAATAATGATGGAGAGGTTGTTGTGGCTGCAGATGGAACGGGAAACTTTAGCACCATCACTGAGGCTATCAACTTTGCTCCAAATAACAGCCTTGGTAGGATAGTGATCTATGTCAAAGAAGGGACTTACGAGGAAAATGTTGAAATCCCAAGTTATAAGACCAACATTGTTCTGATTGGTGATGGAAAGGATGTCACTTTTATTACTGGCAACAGAAGTGTCGTTGATGGCTGGACCACTTTCAGATCTGCAACTCTAGGGCCAGAGAAACATCAAGCAGTGGCCTTGAGAGTGAATGCAGACTTCACTGCTTTCTACAGGTGTGCCATGTATGGTTACCAAGACACTCTTTATGTTCACTCATTTAGACAATTCTACAGGGAGTGTGACATTTTTGGCACCATAGATTACATATTTGGTAATGCAGCAGTGGTTTTACAAGCATCCAACATTATCTCTAGAATGCCAATGCCTGGTCAATTCACTGTCATAACTGCACAGTCCAGGGATTCCCCAGATGAGGACACTGGCATTTCAATCCAAAACTGCTCAATTCTAGCCACCACAGATTTGTACTCCAATTCTGGTAGTAGTCTCAAGAGCTACCTTGGGAGGCCTTGGAGGGTTTATTCTCGCACTGTGTTCCTTGAGTCCTACATTGATCAATTTATTGACCCATTGGGGTGGAAAGAGTGGTCTGATGATCATCAAGGCTTGGACACTTTGTATTATGGAGAGTATGCCAATTATGGGCCTGGTTCTGGGACTAATAACCGAGTCAATTGGGCTGGTTACCATGTAATGGATTATGACAGTGCGTATAACTTCACAGTTTCGGAGTTTATTATTGGTGATGCTTGGCTTGGGTCTACTTCCTTCCCTTATGATGATGGGATTTAA 1533 0.4292 MAIPSPKISLLLITVLFFSHTIATTKSSNASTTLHAGRTNPSPKVSFNSSKLSISIIINPNIINNLLQSLEAAISEATKLSDLLNSAGGHSSIIENKKGAVQDCRELQQSTLTSLKRSLSGIRSQDSRKVIDARTYLSAALTNKDTCLESLDSASGTLKPVLVNSVINSYKDVSESLSMLPKLQRKKASKGNKNRRLLWLLRKNRRRHLQSNNDGEVVVAADGTGNFSTITEAINFAPNNSLGRIVIYVKEGTYEENVEIPSYKTNIVLIGDGKDVTFITGNRSVVDGWTTFRSATLGPEKHQAVALRVNADFTAFYRCAMYGYQDTLYVHSFRQFYRECDIFGTIDYIFGNAAVVLQASNIISRMPMPGQFTVITAQSRDSPDEDTGISIQNCSILATTDLYSNSGSSLKSYLGRPWRVYSRTVFLESYIDQFIDPLGWKEWSDDHQGLDTLYYGEYANYGPGSGTNNRVNWAGYHVMDYDSAYNFTVSEFIIGDAWLGSTSFPYDDGI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2198 510 ProSitePatterns Pectinesterase signature 2. 342 351 IPR033131 -
Aed6g2198 510 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 183 IPR035513 -
Aed6g2198 510 SUPERFAMILY Pectin lyase-like 215 507 IPR011050 -
Aed6g2198 510 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 181 IPR006501 GO:0004857
Aed6g2198 510 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 186 IPR035513 -
Aed6g2198 510 SMART PMEI_2 23 179 IPR006501 GO:0004857
Aed6g2198 510 PANTHER PECTINESTERASE 8 297 - -
Aed6g2198 510 PANTHER PECTINESTERASE 298 509 - -
Aed6g2198 510 CDD PMEI-like_3 66 183 - -
Aed6g2198 510 Pfam Pectinesterase 297 496 IPR000070 GO:0030599|GO:0042545
Aed6g2198 510 PANTHER PECTINESTERASE 8 297 - -
Aed6g2198 510 PANTHER PECTINESTERASE 298 509 - -
Aed6g2198 510 Pfam Plant invertase/pectin methylesterase inhibitor 69 168 IPR006501 GO:0004857
Aed6g2198 510 Gene3D - 211 510 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2198 Aed-Chr6 24239086 24241380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2198 18 510 Carbohydrate Esterase AT2G26440 61.059 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2198 - K01051 gmx:102666380 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2198 6 24239086 24241380 Aed6g2198 6 24239086 24241380 ECH
Aed6g2198 6 24239086 24241380 Aed4g1006 4 9221028 9223288 PCT