Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2196 ATGGCATCAAGGAAAGCTTTTAACCAATACTTGGTTCTGCCAATCCTACTGATGAATTGCTTTGTTTTGGTGGGTCAATGTGCCAGGCCACTGAACAGAGAAGGAGAGGATTTGGTCACAGCAACCTGCAAGCATACCCTCCATTTCCAATTATGCATTTCCACCTTGAGATCAGTCCCTGGTAGCAAGACATCAGATCTGAAAGTGCTTTCTGTGATTGCACTGAATCTCAGCACAACATATGCTGCAGACACTTTGTCCCATGTCTATGAGCTGCAGTTCAATTCTTCTGTTGCCAATGGATCCAACAACAGCAATATTTACACGTCGCGTTGCTTAAGTGACTGTGCAGAGGAATACTCGGAAGCCATAGAGAATTTGAAGGACTCAAAACAAGCACTTGCTGATGAAAATTGTGACCAACTGGATGTTTTGGTTTCTGCTGCTATGTCTGATGCTGTGACATGTCAGGATGGTTTCAAGGACATGCAAAGTGAGAACAGTGATTCCACATCTCCTCTTACTGAGTGGAATTGTTACTTTTCTGAACTTTGTAGTAATGCTCTTGCCATTACAAAACTATTAGTTTAA 591 0.423 MASRKAFNQYLVLPILLMNCFVLVGQCARPLNREGEDLVTATCKHTLHFQLCISTLRSVPGSKTSDLKVLSVIALNLSTTYAADTLSHVYELQFNSSVANGSNNSNIYTSRCLSDCAEEYSEAIENLKDSKQALADENCDQLDVLVSAAMSDAVTCQDGFKDMQSENSDSTSPLTEWNCYFSELCSNALAITKLLV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2196 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 196 IPR035513 -
Aed6g2196 196 Pfam Plant invertase/pectin methylesterase inhibitor 37 191 IPR006501 GO:0004857
Aed6g2196 196 SMART PMEI_2 34 191 IPR006501 GO:0004857
Aed6g2196 196 CDD PMEI-like_1 38 195 - -
Aed6g2196 196 PANTHER OS05G0360900 PROTEIN 26 195 - -
Aed6g2196 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 26 195 - -
Aed6g2196 196 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 195 IPR006501 GO:0004857
Aed6g2196 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 195 IPR035513 -
Aed6g2196 196 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2196 Aed-Chr6 24234162 24234752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2196 25 191 Carbohydrate Esterase AT5G53370 26.966 1.90e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2196 - - gmx:100785210 317.005