Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2185 ATGATGGGTCACGTTGAAAGTGGAGCTACAATTTTGGGTGCACTTGCACTCGCACTCCACCTTGTCCAAGCAACCACCATCGTTATTCTTCCTAGTTCCTCTTCCTTGGAGATCGTGAGGGTTCGGAAAGACGGCGGGGGAGACTTCAAGACGGTGACAGACGCCGTGAACAGCATTCCGTTGGGGAACAAGCGGCAAGTGGTGGTGTGGATCGCCATGGGCGAGTACCGTGAGAAGGTCACTGTCGATAGGTCGAAGCCCTTCGTTACGTTTTATGGAGAGAGGAAAGGGAACACCATGCCGGTCATAACGTACGACGCCACGGCCTTACGCTATGGGACTGTGGACAGCGCCACCGTCGCTGTCGATTCCGACTACTTCGTCGCTGTCAATGTCGCATTTGTGAACTCGTCTCCTATGCCAGGAGAAAATAGTGTTGGAGCACAAGCAGTAGCCATGAGGATATCAGGGGACAAGGCTGCGTTCTACAACTGCAAGTTCGTTGGTTTTCAGGACACTCTATGCGATGATAAAGGCAGGCATTTTTTCAAGGATTGCTACATCCAAGGCACCTACGATTTCATCTTTGGAAATGGAAAATCCATCTACTTGAGAAGTACCATAAAATCGGTGGCGCCAAATAAGGGGTTGAGTGTTATAACAGCACAAGGAAGGGAAAACATGGCACAAGACACTGGATTCACATTCTTGCACTGCAACATAACGGGGAGTGGTAACGGAAACACTTACCTTGGGCGTGCCTGGAAAAAGAGCCCTAGGGTGGTATTTGCTTATACTTACATGGGTTCCCTCATCAATACCCGAGGATGGTTCAACAACCAACTTCCTCAATCCATATCCAACCAGACAATCTACTATGGAGAATATAAGTGCATGGGACCAGGAGCTGTTTCCTCTGGCCGCGTAAAATATCGGAAGATACTTTCTAACAAAGAAGCAAAGCACTTCTTGAGCATGGCTTATATTCATGGAGGAAAGTGGGTTGTCCCACCTCCCAAGCTGTGA 1026 0.4893 MMGHVESGATILGALALALHLVQATTIVILPSSSSLEIVRVRKDGGGDFKTVTDAVNSIPLGNKRQVVVWIAMGEYREKVTVDRSKPFVTFYGERKGNTMPVITYDATALRYGTVDSATVAVDSDYFVAVNVAFVNSSPMPGENSVGAQAVAMRISGDKAAFYNCKFVGFQDTLCDDKGRHFFKDCYIQGTYDFIFGNGKSIYLRSTIKSVAPNKGLSVITAQGRENMAQDTGFTFLHCNITGSGNGNTYLGRAWKKSPRVVFAYTYMGSLINTRGWFNNQLPQSISNQTIYYGEYKCMGPGAVSSGRVKYRKILSNKEAKHFLSMAYIHGGKWVVPPPKL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2185 341 Gene3D - 35 338 IPR012334 -
Aed6g2185 341 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 30 340 - -
Aed6g2185 341 Pfam Pectinesterase 40 331 IPR000070 GO:0030599|GO:0042545
Aed6g2185 341 SUPERFAMILY Pectin lyase-like 38 335 IPR011050 -
Aed6g2185 341 PANTHER PECTINESTERASE 30 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2185 Aed-Chr6 24118561 24120473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2185 29 341 Carbohydrate Esterase AT5G07410 51.438 9.65e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2185 K01051 - gmx:100790786 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2185 6 24118561 24120473 Aed6g2185 6 24118561 24120473 ECH