Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2174 ATGAATATGGTCGCTGGAACTGGAAGGGTTCTCCTCTGCTGCGCAGATTTTGGCCTCTTGGACATCATCTGCTTCACTTGTTTTCCATTCTTTGCTGATGCGGATGGTTTCAGCAGCTCAAAGTGTTGGTTTTGGCGTTTTGATTTGTGCAAGCAGAAGGATTCCTATTTGTTTGAGATTTGGCACTGGCATGTGTGGCTTGAATCCTCGGATGTTAAGTTGTTGAATTTGGAGTGTTTGTGCTGTGTGGAAGTCGTAATGAAGGCTCCATCCAATGGTTACTTGCCTAATTCTGGCGAAGGGGAAGGGAAGACAATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCTTTGGTTTCTTTGCCTCCTGTTGGAAGTCTTGTTGTTTACTTCCCCCAAGGACACAGTGAACAAGTTGCAGCTTCCATGCAAAAGCAGACTGACTTCATACCAAGTTACCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGCCTTGCATCAGGCTGATCCTGAAACTGACGAAGTGTATGCACAGATGACCCTTCAACCTGTAAACAAATATGAGAAAGAAGCAATACTGGCATCAGACATGGGTCTCAAACAAAACCGTCAACCCACTGAGTTCTTTTGCAAAACTCTTACAGCTAGTGACACTAGCACTCATGGTGGATTTTCTGTGCCCCGTAGAGCAGCTGAGAAAATATTCCCACCTTTGGATTATTCAATGCAACCTCCAGCTCAGGAGCTTGTGGCCAAGGATTTGCATGACAATACATGGGCATTTAGACATATTTATCGGGAAGCTGTTGACAGCATGCATATTGGTATTCTTGCTGCTGCGGCTCATGCTGCTGCAAATAACAGCCCATTCACTATATTTTACAATCCAAGGGCTAGCCCCTCTGAATTTGTTGTTCCATTGGCCAAGTATAACAAAGCCATGTACACTCAAGTTTCTCTTGGAATGAGATTTAGAATGATGTTTGAAACTGAGGAGTCTGGAGTACGCAGATATATGGGTACAATCACTGGGATCAGTGATTTGGATCCTGTCCGATGGAAAAACTCTCAGTGGCGCAATATTCAGGTTGGATGGGATGAATCAACAGCTGGTGAACGCCCCAGTAGAGTTTCAATATGGGAAATGGAACCAGTGGTGACTCCTTTCTACATTTGTCCACCTCCTTTTTTTAGGCCCAAGTTCCCCAGGCAACCAGGAATGCCGGATGATGCGTCAAATATGGAAAATGCTTTCAACAGGGCTATGCCATGGATTGGAGATGACTTTGGCGGCATGAAGGATGCCTCAAGTTCAATCTTTCCTGGTTTCAGTTTAATGCAGTGGATGAGCATGCAGCCAAATAATGCTGCTCAATCAGGATGTTTCCCATCCATGCTTCCATCTAACACCCTTCAGGAGAAGCTTCTCAACAGCAACAACTTCTCTTCATCTCTTATGCAGTCACAACAGCTTTCAATGAACCAGCCCCAGAATACACAGAAATCACTTACCATCACTAGAGCTCCCTCTACACTAACTGACGGAGATGCCCCATCATGCTCAACCTCTCCATCTACTAATAACTTCCAGGTGTCTCCTCCAAACCTCCTGAAAAGAAATCAGACACTACCAGCCACATTAGGGGGGAGTTTGATAGTTGAGCCCAATAGCACTAGTAATCTGATACAAGAGCTTCACAGTAAGCCTGACACACAGATCAAACACGAGTTGCTCAATGTAAAAGGACCTAACCAGTTGAAGTATAAAGGAACAATTACTGATCAGCTGGAAGCTTCTTCTTCTGGAACATCTTACTGTCTTGATCCTGGTAATGTCCAGCAGAACTTGCCACTTTCCAACTTCTGCATGGAAGGGGATGTCCAATCACACCCAAGAAACAGTTTACCGTTTGACTCTAATCTGGATGGTCTAACCCCTGATACTATGCTTCTAAGGGGGTATGATTCTCAAAAAGATCTTCAAAATTTTTTGTCTAACTATGGTGGTGCTCCAAGAGACATTGAAACTGAGCTGTCAACTGCTGACATCAGCTCACAGTCGTTTGGAGTGCCAAACTTGCCTTTCAAGCCAGGTTGCTCAAGTGATGTTGGCATCAGTGATGTTGGTATCAATGATACTGGGGTTTTAAATAATAATAATGGCTTGCGGGCTAACCAAACTCCGCGAATGCGAACATATACTAAGGTTCAAAAGCGTGGCTCTGTTGGAAGATGTATTGATGTTACCCGTTACAAGGGATATGATGAACTCCGGCATGATTTAGCTAGAATGTTTGGGATCGAAGGGCAGCTAGAAGATCCTCTAAGGACTGATTGGAAATTAGTATATGTGGATCATGAAAATGACATGCTTCTTGTTGGTGATGACCCTTGGGATGAATTTGTAAGCTGTGTCCAGAGCATAAAGATATTGTCATCTACAGAAGTGCAGCAAATGAGCTTGGATGGGGATTTAGGTGGTAATGTTCCAATCCTCAATCAAGCTTGTAGTGAGACAGACAGTGGCAATGCATGGAGAGGACAGTATGAAGATAACTCGGCTGCCTCGTTTAATAGATGA 2592 0.4402 MNMVAGTGRVLLCCADFGLLDIICFTCFPFFADADGFSSSKCWFWRFDLCKQKDSYLFEIWHWHVWLESSDVKLLNLECLCCVEVVMKAPSNGYLPNSGEGEGKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICMLHNVALHQADPETDEVYAQMTLQPVNKYEKEAILASDMGLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDNTWAFRHIYREAVDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNIQVGWDESTAGERPSRVSIWEMEPVVTPFYICPPPFFRPKFPRQPGMPDDASNMENAFNRAMPWIGDDFGGMKDASSSIFPGFSLMQWMSMQPNNAAQSGCFPSMLPSNTLQEKLLNSNNFSSSLMQSQQLSMNQPQNTQKSLTITRAPSTLTDGDAPSCSTSPSTNNFQVSPPNLLKRNQTLPATLGGSLIVEPNSTSNLIQELHSKPDTQIKHELLNVKGPNQLKYKGTITDQLEASSSGTSYCLDPGNVQQNLPLSNFCMEGDVQSHPRNSLPFDSNLDGLTPDTMLLRGYDSQKDLQNFLSNYGGAPRDIETELSTADISSQSFGVPNLPFKPGCSSDVGISDVGINDTGVLNNNNGLRANQTPRMRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHENDMLLVGDDPWDEFVSCVQSIKILSSTEVQQMSLDGDLGGNVPILNQACSETDSGNAWRGQYEDNSAASFNR 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2174 863 MobiDBLite consensus disorder prediction 513 538 - -
Aed6g2174 863 Pfam Auxin response factor 284 366 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aed6g2174 863 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 479 851 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed6g2174 863 CDD B3_DNA 212 276 IPR003340 GO:0003677
Aed6g2174 863 Gene3D - 731 824 - -
Aed6g2174 863 Pfam AUX/IAA family 731 821 IPR033389 -
Aed6g2174 863 SUPERFAMILY DNA-binding pseudobarrel domain 203 271 IPR015300 -
Aed6g2174 863 PANTHER AUXIN RESPONSE FACTOR 19 479 851 - -
Aed6g2174 863 PANTHER AUXIN RESPONSE FACTOR 19 273 482 - -
Aed6g2174 863 PANTHER AUXIN RESPONSE FACTOR 19 87 270 - -
Aed6g2174 863 Gene3D - 321 392 - -
Aed6g2174 863 ProSiteProfiles PB1 domain profile. 735 828 IPR000270 GO:0005515
Aed6g2174 863 SUPERFAMILY CAD & PB1 domains 748 813 - -
Aed6g2174 863 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 273 482 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed6g2174 863 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 87 270 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed6g2174 863 Gene3D - 210 289 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2174 Aed-Chr6 24040326 24048871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2174 483 863 B3 DNA Binding Superfamily AT1G19220 58.690 1.91e-133 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2174 - K14486 egt:105970928 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2174 6 24040326 24048871 Aed6g2174 6 24040326 24048871 ECH