Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2167 ATGGCCGCTGTTCTCCTCCCTCTCCTCCTCCTCCTCCAATTCCCTCTCTCTTCCTCCCTCCTCCCCGAAAACGAAGCCCTCCTAAACCTAAAAAAATCATTCTCCAACGCGGAACGCCTCTCCTCCTGGGTCCCCGACCAGAAGCCTTGCTCCTCCAAGTGGCTCGGCGTCATGTGCATCAAAGACATCATCACCAACATTCACCTCAACGACCTCTCCCTCTCCGGCAACATCGACGTCGACGCCCTAACGCAAATCCCCACTCTCCGCTCCATCAGCTTCTCCAACAACAACTTCACCGGCCCGATTCCTCCCTTCAACAAACTCGGTGCCCTCAAGGCTCTCTACATATCCCACAACCAGTTCTCAGGCCCAATCCCCTCCGATTTCTTCTCCCAGTTAGCCTCCCTCAAAAAAGTATGGATCTCCAACAACAAGTTCTCCGGCCCCATCCCCGCTTCCGTCGCCAACCTCCGCTTCCTCATCGAGCTCCACCTCGAGAACAACGAGTTCTCCGGCCCCGTCCCGGACTTCAAGCAAGACATAAAAAACTTGGACATGTCCAGCAACAAGCTCGAGGGCGAAATCCCCGCCTCCATGTCCCAGTTCGAAGCTAAGATCTTCTCCAACAATGAAGGCCTCTGCGGGAAGCCGCTGGATAAAGAGTGTGAGGGTTCGGAAGCGGGGATTAATAGCGGTGCAGAAGGCTCTTCGTCGTCGGGGGGCTTGGGGATGAAGGTGGTGGTTCTCATTATAATCGCTGCTATTTTGGCGGCAATATTTCTGTTGGTGCAGTCGAAGAAGGGTCGACGCGACGATGACTTCAGCGTGATGAGCAGGGACAGGGAAAGTGTGAACGAGCAGGTGGTGCAAGTGCACGTGCCGAGCTCCAAACACAGTGGCAAGGGCGGAACCGAGGGCGGGATCACCAAGAAGGAGTCGAAGAAAGGGTCGTCGAGGGGCGGTGTTGGTGACCTTGTAATGGTGAACGATGAGAAGGGTGCATTTGGTATGCCCGATTTGATGAAGGCTTCCGCGGAGGTTCTCGGGAACGGTGGTCTGGGTTCGGCCTACAAAGCTGCCATGTCTAATGGCCTTTCTGTGGTCGTCAAGCGCATGCGCGAGATGAACAAAGTCAGCAGAGACATCTTTGACGCCGAGATGAGACGCTTTGGAAGACTCAGAAACACTAACATCATTACCCCTCTCGCTTACCATTATCGCAAGGAGGAAAAACTCTTTGTCACCGAATACATGTCCAAAGGAAGCTTGTTATACGTCTTGCATGGTGACAGAGGATCTAGTCATGCGGACCTGAACTGGCCAATCCGTTTGAACATTGTGAAGGGAATAGCACGAGGGTTGGGGTTTATTTATTCTGAATTTCCTAACGAAGATCTGCCACATGGAAACCTGAAATCAAGCAATGTCCTACTAAATCAAAATTATGAGCCTCTCCTAAGCGACTTTGCTTTTCATCCACTCATAAACCAAAACTACGCCATACAAACAATGTTTGCCTACAAAACACCCGATTATGTATCGTACCAGCGTGTTTCACAGAAGACGGACGTTTACTGCCTTGGAATCATCGTTCTGGAGATAATAACTGGGAAATTCCCCTCTCAGTATCACAGCAATAATAAGGGTGGGACTGACGTGGTGCACTGGGTGTTGACTGCGATTTCTGAGAGAAGAGAGGCGGAATTGATTGATCCAGAGTTAATGAGTAATCACTCAAGCTCCCTCAATCAAATGCTGCAACTTCTCCAAGTAGGGGCTGCTTGCACAGAGAGCAACCCGGAACAACGACTTAACATGAAGGAAGCCATTAGAAGGATAGAGGAGGTTCAGGTTTAA 1860 0.5113 MAAVLLPLLLLLQFPLSSSLLPENEALLNLKKSFSNAERLSSWVPDQKPCSSKWLGVMCIKDIITNIHLNDLSLSGNIDVDALTQIPTLRSISFSNNNFTGPIPPFNKLGALKALYISHNQFSGPIPSDFFSQLASLKKVWISNNKFSGPIPASVANLRFLIELHLENNEFSGPVPDFKQDIKNLDMSSNKLEGEIPASMSQFEAKIFSNNEGLCGKPLDKECEGSEAGINSGAEGSSSSGGLGMKVVVLIIIAAILAAIFLLVQSKKGRRDDDFSVMSRDRESVNEQVVQVHVPSSKHSGKGGTEGGITKKESKKGSSRGGVGDLVMVNDEKGAFGMPDLMKASAEVLGNGGLGSAYKAAMSNGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNTNIITPLAYHYRKEEKLFVTEYMSKGSLLYVLHGDRGSSHADLNWPIRLNIVKGIARGLGFIYSEFPNEDLPHGNLKSSNVLLNQNYEPLLSDFAFHPLINQNYAIQTMFAYKTPDYVSYQRVSQKTDVYCLGIIVLEIITGKFPSQYHSNNKGGTDVVHWVLTAISERREAELIDPELMSNHSSSLNQMLQLLQVGAACTESNPEQRLNMKEAIRRIEEVQV 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2167 619 MobiDBLite consensus disorder prediction 294 323 - -
Aed6g2167 619 SUPERFAMILY L domain-like 21 203 - -
Aed6g2167 619 SUPERFAMILY Protein kinase-like (PK-like) 347 614 IPR011009 -
Aed6g2167 619 Gene3D Transferase(Phosphotransferase) domain 1 420 619 - -
Aed6g2167 619 Pfam Leucine rich repeat N-terminal domain 23 59 IPR013210 -
Aed6g2167 619 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 619 - -
Aed6g2167 619 Gene3D Ribonuclease Inhibitor 22 130 IPR032675 -
Aed6g2167 619 Gene3D Ribonuclease Inhibitor 131 182 IPR032675 -
Aed6g2167 619 PANTHER LRR RECEPTOR-LIKE KINASE 7 619 - -
Aed6g2167 619 Gene3D Phosphorylase Kinase; domain 1 349 419 - -
Aed6g2167 619 MobiDBLite consensus disorder prediction 305 319 - -
Aed6g2167 619 Pfam Protein kinase domain 347 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2167 619 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2167 619 Gene3D Ribonuclease Inhibitor 183 220 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2167 Aed-Chr6 23985229 23988371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2167 1 619 Receptor kinase-like Gene Family AT3G42880 49.531 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed6g2167 Pkinase 5.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2167 - - gmx:100816925 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2167 6 23985229 23988371 Aed6g2167 6 23985229 23988371 ECH
Aed6g2167 6 23985229 23988371 Aed4g0972 4 8888815 8891599 PCT