Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2159 ATGGACTCATCAATTCGCCTTTCCTTCTACTTCTTCTTCTTCCTTCTCCAACTGACACTGCTATCCGCTGCCAAGAAGACTTACATAGTGCACATGAAACACAGCCACGATTCATCCGTGCACCCCACGCACCGTGACTGGTACGCCGCCACACTAGATTCTTATTCTCCAGAACACTCTCTCCTTTATGCCTACACCGCCGCTTACAACGGCTTCGCTGCCACACTCGACCCTCAACAAGCCCAAGCACTTCGAGCTTCCGATTCTGTCTTGGCCGTCTACGAAGACACGCGCTACACGCTTCACACCACTCGCACCCCCGAGTTCCTGGGCCTTCAGGCCCATCCCGACTTCTGGGAAGACCTCCACCAGGCCTCACACGACGTCGTCATAGGGGTCCTTGACACTGGCGTCTGGCCCGAATCCCAAAGCTTCGACGATTCTCAAATGCCTCAAATCCCCACGCGCTGGCGCGGTAACTGCGAATCCGCGCCTGACTTTGATCCTTCTCTTTGTAATAACAAACTCATCGGAGCTCGAAGCTTCTCCAAGGGCTACCACATGGCATCTTCTAACGCTAGAAAAACCAGAGACCCTGCCACCCCGCGTGACCTCGAGGGCCACGGCACGCACACTGCCTCTACCGCCGCTGGCTCCTCCGTCGCCAACGCCACGCTCCTCGGCTACGCCAACGGAACAGCCCGCGGAATGGCGCCTCAGGCGCGCGTGGCGGCCTACAAGGTCTGCTGGACCGACGGCTGCTTTGCCTCCGACATACTCGCCGGAATGGATCAGGCAATCCAGGACGGCGTCGATGTCCTCTCGCTCTCCCTCGGGGGCTCCTCCTCAGTACCCTACTACTTCGACAACATCGCTATCGGAGCCTTCGCGGCGGTGGAGAGAGGCATCTTCGTCGCTTGCTCGGCGGGGAATACCGGACCTCGCAGCGGTTCTGTGGCGAATGTCGCTCCGTGGATCATGACCGTCGGTGCCGGCACGCTGGACCGAGATTTTCCGGCGTATGCTACTCTCGGGAACGGGAAACGCTTCTCCGGAGTGTCACTTTACAGTGGAGAGGGGATGGGAGACGAACCTGTTGGATTGGTTTATTTCAGCGACCGGTCGAACTCGTCGGGTAGCATTTGCATGCCTGGCTCGCTAGACCCGGAGAGCGTGCGCGGGAAGGTAGTGGTTTGTGACAGGGGACTGAACTCGCGCGTGGAGAAGGGTACGGTGGTGCGCGAGGCCGGCGGTGTTGGAATGATACTCGCGAACACGGCGGCGAGCGGCGAGGGACTGGTGGCGGATAGCCACTTGGTTGCCGCCGTGGCGGTGGGAGAATCCGCGGGTGACGATATAAGAGAGTACGCGTCGTTGGATCCTAATCCAACCGCTGTTCTTAGCTTCGGTGGGACCGTGTTGAACGTGAGGCCCTCGCCAGTAGTGGCAGGTTTCAGCTCTCGCGGGCCGAATGGAGTGACGAGCCAAATACTAAAACCCGATGTTATTGGGCCTGGAGTGAACATCTTAGCGGGATGGTCAGGGGCCGTTGGGCCATCAGGGTCTGAAGACACAAGGAAGACTGGGTTCAACATCATGTCTGGCACTTCCATGTCATGTCCCCACATAAGTGGGTTGGCTGCTCTGTTGAAATCAGCTCATCCAGAATGGAGTCCAAGTGCTATAAAATCTGCACTGATGACAACGGCCTACACCCATGACAACACAGAGTCTCCACTTCGCGATGCTGCAGCGGGTGAAGAATCCCTCTCAACACCATGGGCCTATGGGGCTGGTCATGTCAACCCACAAAAGGCACTATCTCCTGGCCTTGTTTACAACGCTTCAACCCAAGACTACATTGCGTTTTTGTGCTCATTGAACTACACCCTCGACCATCTCAGACTCGTTGTCAAGCACCCTGATGCCAATTGTTCTAAACAATTTTCTAACCCAGGCGACCTCAACTATCCCTCCTTCTCGGTTGTTTTCGGAACCAACAACAAGGTTGTTAGATACACGCGCACGTTAACCAACGTGGGGGAACCGGAGTCTGTGTATGACGTGTCAGTGAACACGCCGTCCACGGTGGATACAACGGTGAATCCTAATAGGCTTCAGTTTGGAGAAGTAGGAGAAAGGCAAACGTACACGGTCACGTTTGTGTCTAATAGGGGTGTTAATGATTCTGTTACGTCTGATTTTGGGAGCATTATGTGGAGCAATGAACAACACCAAGTTAGGAGCCCCGTGGCTTTTACATGGACATTTTTTTGA 2277 0.5569 MDSSIRLSFYFFFFLLQLTLLSAAKKTYIVHMKHSHDSSVHPTHRDWYAATLDSYSPEHSLLYAYTAAYNGFAATLDPQQAQALRASDSVLAVYEDTRYTLHTTRTPEFLGLQAHPDFWEDLHQASHDVVIGVLDTGVWPESQSFDDSQMPQIPTRWRGNCESAPDFDPSLCNNKLIGARSFSKGYHMASSNARKTRDPATPRDLEGHGTHTASTAAGSSVANATLLGYANGTARGMAPQARVAAYKVCWTDGCFASDILAGMDQAIQDGVDVLSLSLGGSSSVPYYFDNIAIGAFAAVERGIFVACSAGNTGPRSGSVANVAPWIMTVGAGTLDRDFPAYATLGNGKRFSGVSLYSGEGMGDEPVGLVYFSDRSNSSGSICMPGSLDPESVRGKVVVCDRGLNSRVEKGTVVREAGGVGMILANTAASGEGLVADSHLVAAVAVGESAGDDIREYASLDPNPTAVLSFGGTVLNVRPSPVVAGFSSRGPNGVTSQILKPDVIGPGVNILAGWSGAVGPSGSEDTRKTGFNIMSGTSMSCPHISGLAALLKSAHPEWSPSAIKSALMTTAYTHDNTESPLRDAAAGEESLSTPWAYGAGHVNPQKALSPGLVYNASTQDYIAFLCSLNYTLDHLRLVVKHPDANCSKQFSNPGDLNYPSFSVVFGTNNKVVRYTRTLTNVGEPESVYDVSVNTPSTVDTTVNPNRLQFGEVGERQTYTVTFVSNRGVNDSVTSDFGSIMWSNEQHQVRSPVAFTWTFF 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2159 758 Gene3D Peptidase S8/S53 domain 128 620 IPR036852 GO:0004252|GO:0006508
Aed6g2159 758 Pfam Subtilase family 127 575 IPR000209 GO:0006508|GO:0008236
Aed6g2159 758 SUPERFAMILY Protease propeptides/inhibitors 26 100 - -
Aed6g2159 758 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 102 IPR037045 -
Aed6g2159 758 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 755 IPR045051 -
Aed6g2159 758 MobiDBLite consensus disorder prediction 188 215 - -
Aed6g2159 758 Gene3D - 624 755 - -
Aed6g2159 758 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Aed6g2159 758 ProSiteProfiles Serine proteases, subtilase domain profile. 98 607 - -
Aed6g2159 758 Pfam PA domain 388 453 IPR003137 -
Aed6g2159 758 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Aed6g2159 758 CDD PA_subtilisin_like 341 465 - -
Aed6g2159 758 CDD Peptidases_S8_3 99 571 IPR034197 -
Aed6g2159 758 Pfam Fibronectin type-III domain 654 752 IPR041469 -
Aed6g2159 758 SUPERFAMILY Subtilisin-like 101 611 IPR036852 GO:0004252|GO:0006508
Aed6g2159 758 PANTHER CUCUMISIN-RELATED 17 755 - -
Aed6g2159 758 Gene3D - 335 474 - -
Aed6g2159 758 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Aed6g2159 758 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Aed6g2159 758 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2159 Aed-Chr6 23941075 23943351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2159 11 758 Subtilisin-like Serine Gene Family AT2G05920 65.426 0.0 988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2159 - - gmx:100786523 1356.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2159 6 23941075 23943351 Aed6g2159 6 23941075 23943351 ECH
Aed6g2159 6 23941075 23943351 Aed4g0958 4 8769207 8771501 PCT