Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2157 ATGGGATCTACCTTCTCTTGTTGTTTTGAGGGTGAATCTGTGTCACCTTCTCCAAAGCCTACTACCAAAGTGGTAGCTATAAAGGGTACCGGTTCTTCTTCCAACAGGGTCTCTATAACGGACTTGAGTTTTCCTGGCTCAACGCTTTCAGAGGACCTCTCTGTTTCTCTAGTGGGGTCTAACCTTCATGTTTTTTCACTCGCGGAGCTCAAGATCATCACGCAGAGCTTCTCTTCTAGTAACTTTCTCGGAGAAGGAGGGTTCGGACCCGTGCATAAGGGCTTCATTGATGACAAGCTTAGGCCCGGTCTCGAGCCTCAGACGGTGGCCGTCAAGCTCTTGGACTTGGACGGTTCTCAGGGCCATAAAGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTGAGGCATCCCCATCTGGTGAAATTGATTGGATATTGCTGTGAAGAGGAACACAGGCTTCTGGATTATAATGCAAAACTCTCTGATTTTGGGTTGGCAAAAGATGGTCCCGAGGGAGACGACACACACGTTTCAACTAGAGTGATGGGCACACAAGGGTATGCGGCCCCAGAATACATCATGACAGGTAAATAA 597 0.4824 MGSTFSCCFEGESVSPSPKPTTKVVAIKGTGSSSNRVSITDLSFPGSTLSEDLSVSLVGSNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRPGLEPQTVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2157 198 SUPERFAMILY Protein kinase-like (PK-like) 46 197 IPR011009 -
Aed6g2157 198 Pfam Protein tyrosine and serine/threonine kinase 81 153 IPR001245 GO:0004672|GO:0006468
Aed6g2157 198 PANTHER OS01G0588500 PROTEIN-RELATED 26 157 - -
Aed6g2157 198 PANTHER OS01G0588500 PROTEIN-RELATED 156 197 - -
Aed6g2157 198 SMART tyrkin_6 77 195 IPR020635 GO:0004713|GO:0006468
Aed6g2157 198 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 26 157 - -
Aed6g2157 198 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 156 197 - -
Aed6g2157 198 ProSiteProfiles Protein kinase domain profile. 77 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2157 198 Gene3D Transferase(Phosphotransferase) domain 1 156 198 - -
Aed6g2157 198 Gene3D Phosphorylase Kinase; domain 1 45 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2157 Aed-Chr6 23928855 23930354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2157 57 158 Trihelix Transcription Factor Family AT5G38560 45.098 2.13e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed6g2157 PK_Tyr_Ser-Thr 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2157 - - gmx:100799411 287.73