Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2145 ATGATGAATGGAAGGAACAACAGGTTCCCCTTCACTCCTTCCCAGTGGCAAGAGCTTGAACACCAAGCTCTCATCTACAAATACATGGCTTCAGGTATCTCCATTCCCCCTGACCTTCTCTTCACCATCAAAAGAACCCACTTGGACTCTCCTCTCTCCTCAAGACTCTTGCCTCACCAGCCTCAACACTTTGGGTGGAACTATTTGCCAATGGGATTGGGGAGGAAAATAGACCCTGAGCCAGGGAGGTGCAGAAGAACAGATGGGAAGAAGTGGAGGTGCTCAAAGGAGGCGTATCCAGATTCAAAGTACTGCGAGAGGCACATGCACAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCAACGACAATAGCAGCAACAACAAATACAGATGCCTCAACCCCAACAATCTTATCAATCACCAAAAACAGTCCTGCTGCTGCACTATCCCCAACCACTCATTCTCTCTCCGTGTCCTCTCATGACACTTACTATCATCATCATCATCACCACCAACCTCACCCTCACCCTCAACAACATTCCTCCCACTCCTTCCTCTATCATCATTCTAGACCCTCTTCCGGTGTTGCTTTGTCATTTCAAGACAACAGTGCCCCCTTGTTTCTCGACACTGCTTCTTGCTCTCAGAATAACAACACTGACTGCAGGTATGTGTATGGACTGAAAGAGGAGGTGGATGAGCATGCCTTCTTCACAGAACCTTCTGGAACCATGAGAAGCTTCTCTGCTTCCTCGATGGAAGATTCATGGCAACTCACACCACTGACAATAAGCTCATCTTCCTCTTCGAAACAGAGGAGTTGCTCTGGTATATCCAATGACAACAACGAATACTCCTACTTGCAACTTCAGAGCCTCAGTGGCAACAACAACTCAAAACAGCCACAGCCACAGCAAGATCAGGGTTGCTATATATCAGGCAATGATGTGAAGTGCGAAACATTCATGAAACTTGGGAAAGAAGAACCTCAGAAAACCGTTCATCGCTTCTTCGATGAATGGCCCCCCAAAAGCAGAGGATCGTGGCTTGATTTGGATGATAAATCATCCACCACCCAGCTTTCAATTTCCATTCCCACGTCTACTCATGATTTTGCAACTTTCAGTTCAACAACCCAACGAGATGGTTGA 1170 0.4667 MMNGRNNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRTHLDSPLSSRLLPHQPQHFGWNYLPMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPTTIAATTNTDASTPTILSITKNSPAAALSPTTHSLSVSSHDTYYHHHHHHQPHPHPQQHSSHSFLYHHSRPSSGVALSFQDNSAPLFLDTASCSQNNNTDCRYVYGLKEEVDEHAFFTEPSGTMRSFSASSMEDSWQLTPLTISSSSSSKQRSCSGISNDNNEYSYLQLQSLSGNNNSKQPQPQQDQGCYISGNDVKCETFMKLGKEEPQKTVHRFFDEWPPKSRGSWLDLDDKSSTTQLSISIPTSTHDFATFSSTTQRDG 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2145 389 MobiDBLite consensus disorder prediction 169 194 - -
Aed6g2145 389 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Aed6g2145 389 PANTHER GROWTH-REGULATING FACTOR 5 3 365 - -
Aed6g2145 389 ProSiteProfiles QLQ domain profile. 10 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed6g2145 389 SMART QLQ_2 9 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed6g2145 389 PANTHER - 3 365 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aed6g2145 389 Pfam WRC 79 121 IPR014977 -
Aed6g2145 389 Pfam QLQ 10 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2145 Aed-Chr6 23835131 23837697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2145 8 257 GRF Transcription Factor Family AT3G13960 43.911 1.38e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aed6g2145 WRC 8.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2145 - - gmx:100783524 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2145 6 23835131 23837697 Aed6g2145 6 23835131 23837697 ECH
Aed6g2145 6 23835131 23837697 Aed4g0946 4 8654155 8655896 PCT