Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2135 ATGCTTACGTGCATAACTCGTCCAAAGAAACCAGATGATGAGTCGGATCCGAACAACGCGACAAGCGCCGCTAAATCGCAAGCCATCAAATCCCTCACTTCTCAGATAAGGGACATGGCGCTGAAGGCTTCGGGAGCGTACAAGCATTGCGCACCGTGCACGGGGCCAGCGACGCAGGGGCGAGTTCGGAGCAACGCCACCGAGTCGGACGCCGATTCCGACCGGTTCCGGTGGTCGTACCGGAGGACGGGAAGCTCGAGCTCGACGACGACTCGGACGTGGGGGAAGGAGATGGAGGCGCGGCTGAAGGGGATTTCGAGCGGGGAGGGAACGCCGAACTCCGCCAGCGGACGGAGGGCGGAGCCGGTGGTGCTTTTCGTTGAAGAGAACGAGCCGAAAGAGTGGGTGGCGCAGGTAGAGCCTGGCGTTTTGATCACGTTCGTGTCGTTGCCACGTGGCGGGAACGATCTGAAGCGCATACGGTTCAGTCGAGAGATGTTCAATAAATGGCAAGCTCAAAGGTGGTGGGCAGAGAACTACGACAGGGTTATGGAACTTTACAATGTTCAAAGGTTTAACCGCCAAGCATTCCCTCTTCCAACGCCACCAAGATCTGAAGATGAGAGCTCAAAGCTTGAATCAGCAGAAGAAAGTCCTGTAACACCTCCACTGAACAAGGAAAGGTTACCTCGTAATATGTATCGTCCAACAGGGATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCACCAATCAATGCAATCTCGGCATTTCTATGACTCAAATGGTATGAACTCAACACCAAAAGTGTCCACCATTAGTGCGGCCAAGACGGAGATATCATCAATGGATGCTTCTATCAGAAGTAGCTCATCCAGAGAGGCTGATCGCTCGGGTGATTTTTCAATCAGCAATGCTAGTGATCTGGAGACTGAATGGGTTGAACAGGATGAACCTGGGGTTTACATTACGATTAGAGCATTGCCAGGTGGCGCAAGAGAGCTCAAACGAGTCAGGTTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1104 0.5226 MLTCITRPKKPDDESDPNNATSAAKSQAIKSLTSQIRDMALKASGAYKHCAPCTGPATQGRVRSNATESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRAEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKLESAEESPVTPPLNKERLPRNMYRPTGMGMGYSSSDSFDHQSMQSRHFYDSNGMNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDFSISNASDLETEWVEQDEPGVYITIRALPGGARELKRVRFSREKFGEMHARLWWEENRARIHEQYL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2135 367 Pfam Transcription factor regulating root and shoot growth via Pin3 133 187 IPR013591 -
Aed6g2135 367 Pfam Transcription factor regulating root and shoot growth via Pin3 311 366 IPR013591 -
Aed6g2135 367 Pfam Transcription factor BRX N-terminal domain 21 53 IPR027988 -
Aed6g2135 367 MobiDBLite consensus disorder prediction 50 72 - -
Aed6g2135 367 ProSiteProfiles BRX domain profile. 312 367 IPR013591 -
Aed6g2135 367 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 367 - -
Aed6g2135 367 MobiDBLite consensus disorder prediction 1 28 - -
Aed6g2135 367 MobiDBLite consensus disorder prediction 196 250 - -
Aed6g2135 367 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 367 IPR044532 -
Aed6g2135 367 ProSiteProfiles BRX domain profile. 133 188 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2135 Aed-Chr6 23788879 23793944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2135 1 367 Major Intrinsic Protein MIP AT1G31880 44.588 8.10e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2135 - - gmx:100794109 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2135 6 23788879 23793944 Aed6g2135 6 23788879 23793944 ECH
Aed6g2135 6 23788879 23793944 Aed4g0934 4 8545066 8551365 PCT