Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2126 ATGGTTTGGTTTCAATGCGAAGTTTGCGGAGACAACCTCAAAAAACCCAAGTTGCCTGGTCACTTCCGAACTTGCTCTGCCTACAAATTGTCGTGCATTGACTGCGGGGAAATTTTTGGGCGTGACACCGTTCAGGATCACACGCAGTGTATCACAGAAGCGGAGAAATATGGACCAAAAGGCCAAGGCAAAACTTTGAACGTTGCAACTGCAAAACCTAACAAGGATAACAAGCAAAGGCCTGAAGTTGATATTAATGTGGGGTTATCCGATAGGCCTCCTTGGTTCTGTAGTCTTTGCAATACGAAAGCTACAAGCAAGCAAACACTTCTTCTCCATGCCGATGGAAAGAAACACAGGGCAAAGGCTAGAGCAATCCATGCTTCAAAGCAACCATCAGTCAAGGCAGACAAATCTGCCACTGATGCAAAGGTTGCTGTGGAGACTGCTTCTAATGATGAGGTGAGAGATGACACAAATGGAGAGCCGCCAAAATTGCAAGAATCTTCTGAACAAAATAACTCAAAGCCAGGGAATGAAATTTCATCAGCAAAGAAAAAGAGGAAACTTGAAGCATTGGAGAATGACCTTATTAAGAAAACCAAGAATGACACTTCAGTTGACATGGGAAATGGAGAAGTAATTCAGGGTGAAGAAGCAACAGGAGAGGGTAATTTGAAAAAAGAAGGCAGTGCTATAAAAAATAAAATAAAATGGAAGAAGCTTATCAAATCAGCCTTGAAATCTCATCCTGATGGAATTTTGAAGATGAAGAAACTGAGAAAAATTGTCCTCAAAGAACTGCATGAATCTGGCATTGTAGTGGATGAAGCCGAGTTTAGTGAGGCGCTTGAGCAGAAGATCAATTCCAGCTCCAGATTTGCAGTTGAGAACAACTATGTGCGATTGCTGGCCAAAGATTGA 924 0.4221 MVWFQCEVCGDNLKKPKLPGHFRTCSAYKLSCIDCGEIFGRDTVQDHTQCITEAEKYGPKGQGKTLNVATAKPNKDNKQRPEVDINVGLSDRPPWFCSLCNTKATSKQTLLLHADGKKHRAKARAIHASKQPSVKADKSATDAKVAVETASNDEVRDDTNGEPPKLQESSEQNNSKPGNEISSAKKKRKLEALENDLIKKTKNDTSVDMGNGEVIQGEEATGEGNLKKEGSAIKNKIKWKKLIKSALKSHPDGILKMKKLRKIVLKELHESGIVVDEAEFSEALEQKINSSSRFAVENNYVRLLAKD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2126 307 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 304 IPR039999 GO:0003677
Aed6g2126 307 SMART ZnF_U1_5 92 126 IPR003604 GO:0003676|GO:0008270
Aed6g2126 307 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Aed6g2126 307 Coils Coil 183 203 - -
Aed6g2126 307 MobiDBLite consensus disorder prediction 149 164 - -
Aed6g2126 307 MobiDBLite consensus disorder prediction 165 180 - -
Aed6g2126 307 MobiDBLite consensus disorder prediction 121 188 - -
Aed6g2126 307 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Aed6g2126 307 Pfam Zinc-finger of C2H2 type 95 119 - -
Aed6g2126 307 Gene3D Classic Zinc Finger 89 132 - -
Aed6g2126 307 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Aed6g2126 307 Gene3D - 1 50 - -
Aed6g2126 307 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Aed6g2126 307 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Aed6g2126 307 SUPERFAMILY beta-beta-alpha zinc fingers 88 128 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2126 77 229 C2H2 Transcription Factor Family AT2G19380 40.523 7.74e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2126 K15263 - gmx:100790272 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2126 6 23717533 23720647 Aed6g2126 6 23717533 23720647 ECH