Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2124 AGACTCTGTGTCAAAGTTTGTGAAGTGAACCAACCCCATAATCATAATCATAATCATGAAGAAAGGAAACTTGGGGCTCGAGATGGCGTTCGAATTGTCACTCAGAATGATACCGAAGCTCCACCTCCAATCAAGCCTACAGACAACCAGTTAACTTTGGCAGACATAGATGTAATCAAAGTTGTTGGAAAGGGAAATGGAGGGGTAGTCCAATTGGTACAACACAAATGGACTAGTCAGTTTTTTGCATTGAAGGTAATTCAGATGAATATTGAGGAGTCTATGCGCAAGCAGATTGCACAAGAGCTGAAAATTAATCAACAAGCACAATGTCCTTATGTTGTTGTCTGCTATCAATCATTCTATGAAAACGGTGTGCTGAAGGGTTTAGTTTATCTCCACCACGAAAGGCATATTATCCACAGAGACTTAAAACCTTCTAATTTGTTAATAAATCATATTGGCGAAGTGAAGATTACTGACTTTGGTGTGAGTGCAATTATGGAAAGTACATCTGGTCAAGCGAATACTTTCATTGGAACTTACAACTATATGTCTCCAGAGAGAATCAATGGAAGCCAGCGAGGCTACAACTACAAAAGTGATATATGGAGTTTGGGACTAATATTACTCGAGTGTGCTTTGGGTCAATTTCCATATGCACCACCTGATCAAAGTGAAATATGGGAAAGCATTTTTGAGCTTATTGAAACCATTGTTGATAAACCTCCTCCTAGTCCTCCATCTGAACAATTTTCTAAAGAATTTTGCTCATTTATTTCAGCATGTCTACAGAAAGACCCAAAGGATCGACTGTCAGCTCAGGAATTAATGGGACATCCCTTTGTCAACATGTATGATGACTTGGAGGTGGATCTGTCAGCTTACTTCTCCGATGCAGGAGCCCTGCTTGCAAATGAGGAGCGTTTGCAGATGAGTGAAGAACCAGCTCCTAGAGTTACGTCAAAGATTCTGTATTTAGTTGTTGAGTGA 993 0.3998 RLCVKVCEVNQPHNHNHNHEERKLGARDGVRIVTQNDTEAPPPIKPTDNQLTLADIDVIKVVGKGNGGVVQLVQHKWTSQFFALKVIQMNIEESMRKQIAQELKINQQAQCPYVVVCYQSFYENGVLKGLVYLHHERHIIHRDLKPSNLLINHIGEVKITDFGVSAIMESTSGQANTFIGTYNYMSPERINGSQRGYNYKSDIWSLGLILLECALGQFPYAPPDQSEIWESIFELIETIVDKPPPSPPSEQFSKEFCSFISACLQKDPKDRLSAQELMGHPFVNMYDDLEVDLSAYFSDAGALLANEERLQMSEEPAPRVTSKILYLVVE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2124 330 ProSiteProfiles Protein kinase domain profile. 1 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2124 330 ProSitePatterns Protein kinases ATP-binding region signature. 62 85 IPR017441 GO:0005524
Aed6g2124 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Aed6g2124 330 Pfam Protein kinase domain 122 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2124 330 CDD PKc_MAPKK_plant_like 71 287 - -
Aed6g2124 330 PANTHER MAP KINASE KINASE 23 126 - -
Aed6g2124 330 Gene3D Transferase(Phosphotransferase) domain 1 128 314 - -
Aed6g2124 330 PANTHER MAP KINASE KINASE 126 305 - -
Aed6g2124 330 SMART serkin_6 56 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2124 330 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 23 126 - -
Aed6g2124 330 SUPERFAMILY Protein kinase-like (PK-like) 46 290 IPR011009 -
Aed6g2124 330 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 126 305 - -
Aed6g2124 330 Gene3D Phosphorylase Kinase; domain 1 32 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2124 Aed-Chr6 23702749 23708377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2124 27 304 MAP Kinase Kinase Gene Family AT4G26070 58.466 5.68e-133 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Aed6g2124 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2124 K20603 - gmx:100789734 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2124 6 23702749 23708377 Aed6g2124 6 23702749 23708377 ECH
Aed6g2124 6 23702749 23708377 Aed4g0924 4 8419060 8424266 PCT