Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2123 ATGGAGGAAATATCTTCTAGTGTTGCAGTACCTTTTACACTTGGTGTTGGAAATTTGATTCAAATAAAGGAGTCTGCAGTGACGACTCACATGGAGATAACTGGGCTGAAGCTCATGGCAAATACAGCAGCGGCTGCTTTGATTTTAAATCCTGCAGTCGACTGTTTAAAGGAGAATCAAGTTGGAGCAGCTTCCCTTGTCTCAGAAATGGTTATTGAATGTGAGAGTAATTGGGTCTTGAATGAAAGCCATAACCTGCAGGCAATAAAGGAAGATGAATTAATGTTAGCAGTGGATTTTCAGTGTTTGCATAGTAGTTCAAGCTCTCAATCTGTGGCTAATGGTTATTCTGAAATAGATTCACCAATTATCATCAAGGTTGATGATGGAATAAAAGAGCCAAGTCCATCGGTGAAGCCAGTGGAGGACACAGTTTCTGTTGCAATGGATATAACTAGTGGGGATCAAAGTGCTGTGCTTCTTGATCAGTTGCCAGTGGAGAATAAAACATGGAGAACAAGCAACCAGAATGCTTTGGAATTGATTAATAGGGACCCTCTGTGGGGTTGTTCATCAATTTGTGGAATGAGACCGGAGATGGAAGATGCTATTTCTGTTAAGCCTCAACTTTTTCAAGCTTCTTCACAGATGCTAATGAATGACCGTGTAAATGAGAACAAAAAAAACTCTCTAGCACACTTTTTTGGTGTCTACGATGGACACGGGGGCATTCAGGTTGCCAATTACTGTCAGGAACGTCTTCATTCAGCGTTGATCGAGGAGATAGAGACTGCACAATTAAGTTTAACTGAAACAAATGGGAGAGATATTGATTGGCAGGACCATTGGAAGAAAGCATTCATCAATTGTTTTCAGAAAATGGATGATGAGGTCGGAGGAATTGGTGCAATTAGCAGTGGTGGCTCTGAGTCTAATATTGAACCTGTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAGCCAAACCCACATAATAGTTGCAAATTGTGGAGATTCAAGAACTGTCTTATACCGTGGAAAAGAAGCCATGCCATTGTCTTCTGACCACAAACCAAATAGAGAGGACGAGCGGGCTAGGATAGAAGCAGCGGGAGGAAAAGTCATACATTGGAAAGGATATCGAGTTCTTGGTGTCTTGGCTATGTCAAGGTCCATAGGTGACAGATACCTGAAACCATGGATAATTCCAGAACCTGAAGTCAATATTGTGCGTAGAGAGAAAAACGATGAGTGTCTTATTCTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCCTGTGAGGTTGCAAAGAAGCGGATCCTTCTTTGGCACAAGAAGTACGGTGATAACAGCGGCAGCGGCACAATGGGATGCAGCGAAGGAGGTGGTGATCCTGCAGCTCAGTCAGCTGCAGAGTATCTAACTAAGCTTGCCATCCACAGGGGAAGCCAAGATAACATCTCTGTAATTGTGATAGACTTAAAGGCTCAAAGAAAAATTAAGAGAAAGCCATAA 1536 0.4245 MEEISSSVAVPFTLGVGNLIQIKESAVTTHMEITGLKLMANTAAAALILNPAVDCLKENQVGAASLVSEMVIECESNWVLNESHNLQAIKEDELMLAVDFQCLHSSSSSQSVANGYSEIDSPIIIKVDDGIKEPSPSVKPVEDTVSVAMDITSGDQSAVLLDQLPVENKTWRTSNQNALELINRDPLWGCSSICGMRPEMEDAISVKPQLFQASSQMLMNDRVNENKKNSLAHFFGVYDGHGGIQVANYCQERLHSALIEEIETAQLSLTETNGRDIDWQDHWKKAFINCFQKMDDEVGGIGAISSGGSESNIEPVAPETAGSTAVVAILSQTHIIVANCGDSRTVLYRGKEAMPLSSDHKPNREDERARIEAAGGKVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVRREKNDECLILASDGLWDVMTNEEACEVAKKRILLWHKKYGDNSGSGTMGCSEGGGDPAAQSAAEYLTKLAIHRGSQDNISVIVIDLKAQRKIKRKP 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2123 511 Pfam Protein phosphatase 2C 213 494 IPR001932 -
Aed6g2123 511 SUPERFAMILY PP2C-like 185 502 IPR036457 -
Aed6g2123 511 ProSiteProfiles PPM-type phosphatase domain profile. 187 501 IPR001932 -
Aed6g2123 511 SMART PP2C_4 177 499 IPR001932 -
Aed6g2123 511 ProSitePatterns PPM-type phosphatase domain signature. 234 242 IPR000222 GO:0043169
Aed6g2123 511 PANTHER ALPHABET, ISOFORM E-RELATED 125 511 - -
Aed6g2123 511 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 125 511 - -
Aed6g2123 511 CDD PP2Cc 189 501 IPR001932 -
Aed6g2123 511 Gene3D - 180 511 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2123 Aed-Chr6 23699585 23705558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2123 147 511 PP2C-type Phosphatase Gene Family AT4G26080 56.522 2.89e-137 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2123 K14497 - gmx:100789207 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2123 6 23699585 23705558 Aed6g2123 6 23699585 23705558 ECH
Aed6g2123 6 23699585 23705558 Aed4g0923 4 8415285 8421910 PCT