Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2117 ATGAATATGTTCCTTTTGCTTTTGGCAGTAAAGTCCGAACTCACAACAGATTTCTATAAGTCATCATGTCCTAACGTTTCCAAAATAGTAAGGAGAGAGGTTCAAAAAGCTCTCAATAATGAGATGCGAATGGCTGCTTCTTTGCTTCGCCTTCACTTTCATGATTGCTTTGTCAATGTTCTGCTAGGACGAAGAGATGGAACAGTCTCAAACGGAGCACTAGCAAATGAGGCACTTCCTTCGCCATTTGATCCATTGGATACCATCATTTCAAAGTTTACTAATATGGGCCTTAATCTCACAGATGTTGTTTCTTTATCAGGTGCTCATACTATTGGTCGAGCAAGGTGTACACTGTTTAGCAACAGATTGTTCAACTTCTCAGGAACAGGTGCAGCAGACACTACACTAGAGACTGACATGCTCTCTGAGCTGCAAAGTTTGTGTCCTCAAAATGGAGATGGAAACGTTACTACAGTCCTTGATCGGAACTCAACGGATCTATTTGACAATCACTACTTCAAGAACTTGCTCAGTGGAAAGGGGCTTCTCAGTTCTGACCAGATTCTATTTTCTAGTGATGAGGCTAATTCAACTACTAAACCTTTAGTCCAAAGCTATGCCAATGATAGTGGACTCTTCTCTGGGGACTTTGTCAATTCTATGATCAAGATGGGGAATATAAATCTAAAGACTGGGACTGACGGAGAGATTAGGAAGAACTGCAGAGTCATCAATTCTTAG 744 0.4099 MNMFLLLLAVKSELTTDFYKSSCPNVSKIVRREVQKALNNEMRMAASLLRLHFHDCFVNVLLGRRDGTVSNGALANEALPSPFDPLDTIISKFTNMGLNLTDVVSLSGAHTIGRARCTLFSNRLFNFSGTGAADTTLETDMLSELQSLCPQNGDGNVTTVLDRNSTDLFDNHYFKNLLSGKGLLSSDQILFSSDEANSTTKPLVQSYANDSGLFSGDFVNSMIKMGNINLKTGTDGEIRKNCRVINS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2117 247 Gene3D - 60 246 - -
Aed6g2117 247 ProSitePatterns Peroxidases proximal heme-ligand signature. 102 112 IPR019793 -
Aed6g2117 247 ProSitePatterns Peroxidases active site signature. 45 56 IPR019794 GO:0004601
Aed6g2117 247 PRINTS Haem peroxidase superfamily signature 102 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2117 247 PRINTS Haem peroxidase superfamily signature 162 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2117 247 PRINTS Haem peroxidase superfamily signature 54 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2117 247 ProSiteProfiles Plant heme peroxidase family profile. 1 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2117 247 PANTHER PEROXIDASE 72-RELATED 5 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2117 247 Pfam Peroxidase 58 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2117 247 Gene3D - 14 59 - -
Aed6g2117 247 PANTHER PEROXIDASE 59 59 245 - -
Aed6g2117 247 PANTHER PEROXIDASE 59 5 58 - -
Aed6g2117 247 CDD secretory_peroxidase 13 245 IPR033905 GO:0004601|GO:0042744
Aed6g2117 247 PRINTS Plant peroxidase signature 23 42 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2117 247 PRINTS Plant peroxidase signature 47 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2117 247 PANTHER PEROXIDASE 72-RELATED 59 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2117 247 SUPERFAMILY Heme-dependent peroxidases 14 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed6g2117 247 Gene3D Peroxidase, domain 2 80 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2117 Aed-Chr6 23661861 23663470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2117 3 59 Peroxidase AT5G19890 56.140 3.95e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2117 K00430 - gmx:100814964 345.125