Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2113 ATGGAACCTCGTGTTGGGAATAAGTTTCGCCTGGGTCGGAAGATCGGAAGCGGCTCCTTTGGGGAGATCTATTTAGGCACTAATATTCAAACGAACGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACAAAACATCCCCAGTTGCTGTATGAGTCCAAGTTGTACCGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTCAGATGGTTTGGAGTGGAGGGAGATTACAATGTTTTGGTGATGGATCTGCTTGGACCCAGTCTTGAAGATCTATTTAACTTCTGTAGTAGAAAGCTATCACTAAAGACAGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTCATTCATTCAAAGTCATTTCTGCATCGGGATATCAAACCGGATAATTTTCTAATGGGATTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTTGGTTTGGCTAAGAAATACAGAGATAGTTCAACACATCAACACATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGCGGGAACAAAGAAACAGAAGTACGAGAAGATCAGTGAGAAAAAGGTTTCTACCTCGATTGAAGCCTTGTGTCGAGGTTATCCAACAGAATTTGCATCTTACTTCCATTACTGCCGATCATTGAGGTTTGATGATAAGCCAGATTATGCTTACCTCAAAAGGATATTTCGTGACCTGTTTATTCGTGAAGGGTTTCAGTTTGATTATGTCTTTGACTGGACCATTTTGAAGTATCAGCAATCACAGCTAGCCACTCCTCCAACACGGGCCATTGTAATGCTGGAACCAGTTCTGGAATTCCCCCCGGCTGTTACTAATGCCGAAAGGCATACAGGAGGGGAAGAAGGGCGGCCTCCTGCTTTGGTTTCAGTGGATTCCTCGAGGCGCAGAATGTCAGGGCCCATTTTAAATACTTTATCAAGTGCCAATGTCTTGGGTCAGTCAAGTGGATCATCAAGGCGGGTTGCGGTTTCTAGTAGCCGTGATGCATTTGTTGGTGCTGAGTCAGATATTCGTACTCGCACTGCTGAGGCTAGCCCTGGAGCAGCACATAGAGGTTTAAGTGGGTCAAGAAGTTCACCAATTGGATCTTCTGATCCCAAGAGAGTTGTATCATCCGGGAGAAATGCTTCTTCTCATGTGAAAAATTATGACACTGCACTTAGGGGCATGGAAGGTTTGCAATTAGAGAATGATGAGAGGACCCATTATTGA 1278 0.4358 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPTRAIVMLEPVLEFPPAVTNAERHTGGEEGRPPALVSVDSSRRRMSGPILNTLSSANVLGQSSGSSRRVAVSSSRDAFVGAESDIRTRTAEASPGAAHRGLSGSRSSPIGSSDPKRVVSSGRNASSHVKNYDTALRGMEGLQLENDERTHY 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2113 425 SUPERFAMILY Protein kinase-like (PK-like) 5 261 IPR011009 -
Aed6g2113 425 Gene3D Phosphorylase Kinase; domain 1 2 85 - -
Aed6g2113 425 Gene3D Transferase(Phosphotransferase) domain 1 191 279 - -
Aed6g2113 425 PANTHER CASEIN KINASE-RELATED 189 402 - -
Aed6g2113 425 PANTHER CASEIN KINASE-RELATED 1 188 - -
Aed6g2113 425 PANTHER CASEIN KINASE I-LIKE 1 188 - -
Aed6g2113 425 PANTHER CASEIN KINASE I-LIKE 189 402 - -
Aed6g2113 425 SMART serkin_6 9 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2113 425 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aed6g2113 425 ProSiteProfiles Protein kinase domain profile. 9 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2113 425 MobiDBLite consensus disorder prediction 294 315 - -
Aed6g2113 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aed6g2113 425 MobiDBLite consensus disorder prediction 378 404 - -
Aed6g2113 425 Pfam Protein kinase domain 10 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2113 425 MobiDBLite consensus disorder prediction 359 407 - -
Aed6g2113 425 Gene3D Transferase(Phosphotransferase) domain 1 86 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2113 Aed-Chr6 23633476 23638055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2113 7 181 EF-hand Containing Proteins AT2G17890 27.473 2.84e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aed6g2113 Pkinase 6.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2113 - - csv:101206138 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2113 6 23633476 23638055 Aed6g2113 6 23633476 23638055 ECH
Aed6g2113 6 23633476 23638055 Aed4g0912 4 8292310 8299053 PCT