Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2109 ATGTCAGCCAAAGAAGAAGCTACAGCTACTAATAATTATACTGATCAAGAAAACAAAGCTAAAGTAGCGAATTCCTCAAATGAATGTATATTGAATGTTAGGGTTTCGGAATTGAGTAGTTCATCATCAGAAGAGCGAATGGTGGAGTTGCAAGTGACAGTGATCAGAGGAGAAAGTAGTCATTGCCAAGTTGATGTGTTGATTCGGTTATTGGAATTCATAGAAAGGGTTCAGAACGTAAACTTGATTTCAATGGGCGCAAACAACCATATTATTACAGGAGGGACAGCCATTAACCAATTAACCTTCAGGCTGAGGATTATTCAGACTCAGGGCAGTGAATGGGATGAGCATGCCTTCGAGGAAGTTGTAAGAAGAGTGGTTGCTGACACGATACAATCACACAGACAACTAAATGTTATTAAATCATGA 432 0.3912 MSAKEEATATNNYTDQENKAKVANSSNECILNVRVSELSSSSSEERMVELQVTVIRGESSHCQVDVLIRLLEFIERVQNVNLISMGANNHIITGGTAINQLTFRLRIIQTQGSEWDEHAFEEVVRRVVADTIQSHRQLNVIKS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2109 143 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED 15 131 - -
Aed6g2109 143 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 15 131 IPR044658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2109 Aed-Chr6 23605598 23606313 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2109 31 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 43.000 2.15e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2109 - - gmx:102667064 142.51