Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2098 ATGGCCCCAAGAATTTTACTATGCGGCGACGTTTTAGGGCGCCTTAACCAGCTCTTCAAGCGCGTCTCATCGGTGAACAAATCCGCAGGTCCATTCGACGCGCTCTTGTGCGTGGGTCAGTTCTTCCCGGACTCGCCGGAGCAGCTGGAGGACTTCATGACATACATCGAAGGTGGCTCCCACATTCCTCTCCCGACATACTTCATCGGCGACTACGGCGTCGCCGCCCCCAAAATTCTCTTGCAAGCTTCCAAGGACTCCGCCAACCAAGGCTTCAAGATGGACGGCTTCAAGGTTTGCGACAACTTGTTTTGGTTGAAAGGCAGTGGCAAATTCCCCCTCTTCGGGTTGTCCGTGGCCTATTTATCTGGTAGGAACTCATCCACTGCTCAACAGTTTGGAACTTACACTGAAGATGATGTTGATGCTTTGCGTGCAATTGCTGAGGAACCTGGACTTGTTGATTTTGGGGTCACCAATAGAGCAGCTGATTCCGACATTCCTGCTGGACTCTCTGATGATGTAGGCAGTGATTCAACCATAGCGGAGTTAGTACAAGAGATCAAACCACGTTATCACATTGCAGGCACTAAAGGTATATACTATGCCCGTGAACCATATGCCAATGTTGATGCTGTGCATGTCACTCGTTTCATAGGGCTTGCATCTGTTGGAAATAAAGATAAGCAGAAGTTTATTCATGCACTCTCCCCCACACCTGCTTCCACCATGTCTTCAACTGAGATTGCCATGAAAACCACTAATACCACCTTATCGCCATACACATTGGTGGAGAAAAGAACTTCTACTATGGACTCAACAAAGAGATCCAGTGATTCTATCTCTGATCCTCAATATTGGAGATATGATGTTTCTCAAAAGCGACAAAAACATGAATCTGGACCCAGTGATAAATTGTGTTTCAAATTTGTTTCTTCTGGCTCTTGTCCACGAGGAGAGAACTGCAATTTTCGACATGATATAGATGCAAAGGAGCAGTGTATGAGAGGTGTTTGTTTTGATTTTTTGAACAAGGGAAAATGTGAAAGGGGTCCAGATTGCAACTTTAAGCACAGCTTGCAGGATGTGGGTGACAGGCTGATTTCTAGAAAGCCTGGATCTGGAAGGTCAAAAGAATGTTGGTTTTGCTTGTCAAGCCCAAATGTGGAGTCACATTTAATCATAAGCATTGGGGAAAATTACTACTTGGCACTGGCTAAAGGTCCACTTGTTGAAGACCACGTACTGATAATACCAGTCGAGCATATACCTAGTACCTTATCTATGTCTTCTGAATCTGAAATTGAACTCGTTAGGTTTGAGAACAGTCTCAATAGTCACTGCAAGAGCCAAGAGAAGGAAGTCATCTTTTTTGAGTGGGTCTCCATTCGTGGCACTCATGCCAATCTTCAGGCCATCCCCATTCCGTCTTCCAAATCAGTTATGGTTGAAAAAGTTTTCAATTTAGCTGCACAGAAGTTGGGATTTAAATTTGTGGCTAAGAAATTTGATAGCATTTCTGATGGAAGGAAGTTTTTGAAGGCGCAAATTGATGGGGATTCAAGCTTGTTCTATGCTCAAATCCCAGGAGGCACAATTCTGCTGCATCATGTTGAAGAGAAAGAGAAATTTCCTGCCCAATTTGGTCGTGAGGTTCTGTCTGGGTTGCTTAATATGGCAGATAATTCTGATTGGAGGAATCGCAAACATAGGAAAGATGAAGAAATGAAAATTGTTGAAGATTTGAAGAGCCGATTTCAAGAATATGATCCAAACTCGTCTATGGCAAATAGAATCGCCAAGATGATGTTGCTATTCTATAACTTCGGCTACGAGCATCAGTCAGCAAGCAGCTGCTGCATTCAAGTTTTGAAACGGGTTTTTTTGTACGTAATTGAGAAAGTATTCGAATTTGTTTCTTTCGAGAGGCAGGGGGGTTGA 1941 0.4389 MAPRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQLEDFMTYIEGGSHIPLPTYFIGDYGVAAPKILLQASKDSANQGFKMDGFKVCDNLFWLKGSGKFPLFGLSVAYLSGRNSSTAQQFGTYTEDDVDALRAIAEEPGLVDFGVTNRAADSDIPAGLSDDVGSDSTIAELVQEIKPRYHIAGTKGIYYAREPYANVDAVHVTRFIGLASVGNKDKQKFIHALSPTPASTMSSTEIAMKTTNTTLSPYTLVEKRTSTMDSTKRSSDSISDPQYWRYDVSQKRQKHESGPSDKLCFKFVSSGSCPRGENCNFRHDIDAKEQCMRGVCFDFLNKGKCERGPDCNFKHSLQDVGDRLISRKPGSGRSKECWFCLSSPNVESHLIISIGENYYLALAKGPLVEDHVLIIPVEHIPSTLSMSSESEIELVRFENSLNSHCKSQEKEVIFFEWVSIRGTHANLQAIPIPSSKSVMVEKVFNLAAQKLGFKFVAKKFDSISDGRKFLKAQIDGDSSLFYAQIPGGTILLHHVEEKEKFPAQFGREVLSGLLNMADNSDWRNRKHRKDEEMKIVEDLKSRFQEYDPNSSMANRIAKMMLLFYNFGYEHQSASSCCIQVLKRVFLYVIEKVFEFVSFERQGG 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2098 646 CDD MPP_CWF19_N 6 224 - -
Aed6g2098 646 ProSiteProfiles Zinc finger C3H1-type profile. 338 361 IPR000571 GO:0046872
Aed6g2098 646 Gene3D - 290 363 - -
Aed6g2098 646 Pfam Protein similar to CwfJ C-terminus 2 502 590 IPR006767 -
Aed6g2098 646 ProSiteProfiles Zinc finger C3H1-type profile. 301 329 IPR000571 GO:0046872
Aed6g2098 646 SUPERFAMILY HIT-like 378 440 IPR036265 -
Aed6g2098 646 SUPERFAMILY CCCH zinc finger 304 330 IPR036855 GO:0046872
Aed6g2098 646 SMART c3hfinal6 335 360 IPR000571 GO:0046872
Aed6g2098 646 SMART c3hfinal6 303 328 IPR000571 GO:0046872
Aed6g2098 646 PANTHER CWF19-LIKE PROTEIN 1 1 592 - -
Aed6g2098 646 SUPERFAMILY CCCH zinc finger 337 363 IPR036855 GO:0046872
Aed6g2098 646 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 1 592 IPR040194 -
Aed6g2098 646 Gene3D - 373 494 IPR036265 -
Aed6g2098 646 Pfam Protein similar to CwfJ C-terminus 1 376 487 IPR006768 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aed6g2098 CwfJ_C_1 5.7e-37 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2098 K24939 - gmx:100782106 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2098 6 23529816 23534338 Aed6g2098 6 23529816 23534338 ECH