Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2084 ATGCTTGCTTCTTTCCCCAACAATGCCTCGAAGAATACTCCCAGGCGTATTAAACGGCCAGCAAAGGTTGTGATGGAGAACACATCTCTGACAAGTCAGCAGCATGGACCGATGGAGTTCATTAGTGGAAACCTTCGGACAATAAGTTACTTTGACTTCCGGACATTGAGGAGAGCCACTAAGAATTTCCATCCTCGAAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCAGGGAAAGTTGGCAGATGGAAGGCTTATTGCAGTAAAGACATTGTCTCTTGACAAGTCTCAACAAGGTGAAAAAGAATTTCTGGCAGAAGTGAGAATGATCACAAGCATCCAACACAAAAATCTGGTTCGCCTTCTGGGATGTTGCACAGATGGGCCTCAAAGGATACTTGTGTACGAATACTTGAAGAACCGAAGTTTGGACCTCATAATACATGCTCCTGAGTATGCGATTAGAGGAGAGTTGTCTGAAAAGGCAGACATCTATAGTTTTGGAGTTCTTGTGCTAGAAATCATCAGTTGCAGGAAAAACACAGTTCTTACTTTACCATCAGAAATGCAGTACCTCCCTGAATATGCATGGAAACTCTATGAGAAGTCAAAGTTGATGGAAATTGTGGATCCAAAGCTGAGAGAGCAAGGCATAGAAGAAAAGGATGTGATGCAAGCATTTCACGTGGCCTTGTTATGCCTTCAGCCACACGCGGAATTGAGGCCTGCGATGTCTGAGATCGTAGCAATGTTAACATTCAAAGTTGAAATGGTTACAACACCAATGAGGCCATTATTCGTTGATCGAAGGCGCGTGATGGATGATGAGCACCATTCATGGGAAACCATATCCGAGCCTTTCACCACTGCAGTACTAGTACGTGGCAATTAA 897 0.4392 MLASFPNNASKNTPRRIKRPAKVVMENTSLTSQQHGPMEFISGNLRTISYFDFRTLRRATKNFHPRNLLGSGGFGPVYQGKLADGRLIAVKTLSLDKSQQGEKEFLAEVRMITSIQHKNLVRLLGCCTDGPQRILVYEYLKNRSLDLIIHAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTVLTLPSEMQYLPEYAWKLYEKSKLMEIVDPKLREQGIEEKDVMQAFHVALLCLQPHAELRPAMSEIVAMLTFKVEMVTTPMRPLFVDRRRVMDDEHHSWETISEPFTTAVLVRGN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2084 298 Gene3D Phosphorylase Kinase; domain 1 34 137 - -
Aed6g2084 298 Pfam Protein tyrosine and serine/threonine kinase 67 149 IPR001245 GO:0004672|GO:0006468
Aed6g2084 298 Pfam Protein tyrosine and serine/threonine kinase 151 253 IPR001245 GO:0004672|GO:0006468
Aed6g2084 298 Gene3D Transferase(Phosphotransferase) domain 1 138 263 - -
Aed6g2084 298 SUPERFAMILY Protein kinase-like (PK-like) 47 284 IPR011009 -
Aed6g2084 298 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 151 270 - -
Aed6g2084 298 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 150 - -
Aed6g2084 298 ProSiteProfiles Protein kinase domain profile. 63 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2084 298 PANTHER RECEPTOR-LIKE KINASE 151 270 - -
Aed6g2084 298 PANTHER RECEPTOR-LIKE KINASE 42 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2084 Aed-Chr6 23451587 23453958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2084 51 259 Receptor kinase-like Gene Family AT1G53440 32.993 1.66e-36 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed6g2084 PK_Tyr_Ser-Thr 2.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2084 - - gmx:100812302 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2084 6 23451587 23453958 Aed4g0889 4 8060572 8063154 PCT