Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2081 ATGGAAGACAATAGTAATAATGAAGAATGCAAGATCAGTACTGGGCTGTGTTTGGGACTTGGAATGGGAGGGCATGTTGTTCCAAGGAAGAAGAAAGAGAACAAGTCTGTAGCGTGCCTAGACCTAGCGTTTGAGCTTTGTCCAAAAGGAGAATTATCCATTAACGTGAATCATGATCATGATCATGATAAGGTAGAGAGAATCAGCAGCTTGGAGAGATCAATCAACGACTACCCCAATGAAAAGAGCACTGATTCTGATGATGATAACAGCAACAATAACCGATGCAGAAAGAAACTGAGGCTTTCCAAGGATCAATCAGCCATGCTTGAGAACAGCTTCAAACAGCATAGCACTCTTAATCCGGTCCAGAAACAAGCACTTGCTGATCAATTGAATTTAAAGACCAGACAAGTTGAAGTTTGGTTTCAAAACAGAAGAGCAAGGACCAAACTGAAGCAGACAGAAGTGGACCGCGAGTTGTTGAAAAAACACTGTCAAAATCTAAGTGATGAAAACAAAAGATTGAAGAGGGAATTGCAGGAACTACGTGCACTTAAGGTTGGACCCTCTTCACCACTATGCATTCAACTATCCAAAACGGCAACTCTGACTATGTGTTCTTCCTGCGATGATAAACTAATAAAGCTCGATGAAGGAAACAACAACAACAACAACAACATAGAGTTAGCTAGAGGGTAG 702 0.4117 MEDNSNNEECKISTGLCLGLGMGGHVVPRKKKENKSVACLDLAFELCPKGELSINVNHDHDHDKVERISSLERSINDYPNEKSTDSDDDNSNNNRCRKKLRLSKDQSAMLENSFKQHSTLNPVQKQALADQLNLKTRQVEVWFQNRRARTKLKQTEVDRELLKKHCQNLSDENKRLKRELQELRALKVGPSSPLCIQLSKTATLTMCSSCDDKLIKLDEGNNNNNNNIELARG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2081 233 Coils Coil 152 186 - -
Aed6g2081 233 MobiDBLite consensus disorder prediction 78 95 - -
Aed6g2081 233 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 13 222 - -
Aed6g2081 233 ProSiteProfiles 'Homeobox' domain profile. 93 153 IPR001356 GO:0003677
Aed6g2081 233 CDD homeodomain 97 154 IPR001356 GO:0003677
Aed6g2081 233 ProSitePatterns 'Homeobox' domain signature. 128 151 IPR017970 GO:0000981|GO:0006355
Aed6g2081 233 PANTHER - 13 222 - -
Aed6g2081 233 MobiDBLite consensus disorder prediction 71 95 - -
Aed6g2081 233 Pfam Homeodomain 97 151 IPR001356 GO:0003677
Aed6g2081 233 SMART HOX_1 95 157 IPR001356 GO:0003677
Aed6g2081 233 SUPERFAMILY Homeodomain-like 81 154 IPR009057 -
Aed6g2081 233 Gene3D - 101 151 - -
Aed6g2081 233 SMART halz 153 198 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2081 Aed-Chr6 23434274 23435645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2081 86 211 Homeobox Transcription Factor Family AT4G16780 65.079 4.66e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aed6g2081 Homeodomain 1.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2081 K09338 - gmx:100812222 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2081 6 23434274 23435645 Aed4g0888 4 8054466 8055724 PCT