Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2077 ATGGGGAACTGTTGGAGTCTTCAATCAGGTTCTCCAGGCGATCAACGTAACTCCAATACAAACCCCATCAATCAATCAGGGAATATTCAATTTTCTGCTGGTCTGAGCAATACAAGATTAATACAGAATGGTAATTCTACTTCTCTTGGGCGTAGCAGCCACTCTGGAGGAATCAGCGGGTTCTTTGGGCCAAGTAGTAGTAATAACTACTCAACTGGAAATAACACTAGCACATCCCTTTGGGGCGGCTCTGAGAATAGCCAAGCCTCTCGGGTCAGAGATGAAGAGGAGTTTCCTCAAGGGCAGATCCTGGATGCTCCAAACTTGAGAGCATTTACTTTGGCAGAACTGAAGGCAGCCACCAAAAATTTCAGAACTGAAACTGTGTTAGGGGAGGGGGGTTTTGGTAGAGTATACAAGGGTTTGGTTAGAGGTGAGGGTTTGACTATTGCCATCAAGAGATTGAATCATCAAAGCTTCCAAGGATTTGCGCAATGGCAGTCAGAGGTGAATTTCTTAGGGACACTTTCTCATCCCAACCTTGTTAAGTTGTTGGGATTTGGACGAGAGGATAACGAGCTGTTCCTTGTGTATGAATTTATGCATCGTGGCAGCTTGGACAACCACCTATTTGGAAGTAAGAACTGA 648 0.4491 MGNCWSLQSGSPGDQRNSNTNPINQSGNIQFSAGLSNTRLIQNGNSTSLGRSSHSGGISGFFGPSSSNNYSTGNNTSTSLWGGSENSQASRVRDEEEFPQGQILDAPNLRAFTLAELKAATKNFRTETVLGEGGFGRVYKGLVRGEGLTIAIKRLNHQSFQGFAQWQSEVNFLGTLSHPNLVKLLGFGREDNELFLVYEFMHRGSLDNHLFGSKN 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2077 215 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Aed6g2077 215 Pfam Protein kinase domain 125 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2077 215 MobiDBLite consensus disorder prediction 1 30 - -
Aed6g2077 215 Gene3D Phosphorylase Kinase; domain 1 108 200 - -
Aed6g2077 215 MobiDBLite consensus disorder prediction 66 88 - -
Aed6g2077 215 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 11 213 - -
Aed6g2077 215 MobiDBLite consensus disorder prediction 66 89 - -
Aed6g2077 215 PANTHER OS01G0588500 PROTEIN-RELATED 11 213 - -
Aed6g2077 215 SUPERFAMILY Protein kinase-like (PK-like) 103 214 IPR011009 -
Aed6g2077 215 ProSiteProfiles Protein kinase domain profile. 124 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2077 Aed-Chr6 23414510 23416270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2077 112 215 Receptor kinase-like Gene Family AT1G70130 46.154 1.01e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed6g2077 Pkinase 5.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2077 - - gmx:100816903 328.946