Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2076 ATGTTTCTAATTTTTTGCTTTTGTCAGTCTTATACGGTCAAGTTATCAGACTTTGGCTTGGCTAAATCTGTTAATTCACCTGATCAGAGTCACGTATCAACACAGGTTGTGGGGACGCATGGCTATGCTGCTCCTGAGTACATTGCAACAGAGACTACTCTTCGGAATGCAGTATATTGTCTTCCTCACATTGTTCCATTTCATAAACTGATTCCTGAAATGTTGTTATACATTTCAGAAACTACTTTCTTGCATAATGCACTTGATTGGAAATGA 276 0.3804 MFLIFCFCQSYTVKLSDFGLAKSVNSPDQSHVSTQVVGTHGYAAPEYIATETTLRNAVYCLPHIVPFHKLIPEMLLYISETTFLHNALDWK 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2076 91 PANTHER OS01G0588500 PROTEIN-RELATED 9 52 - -
Aed6g2076 91 Pfam Protein kinase domain 9 52 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2076 91 ProSiteProfiles Protein kinase domain profile. 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2076 91 Gene3D Transferase(Phosphotransferase) domain 1 3 61 - -
Aed6g2076 91 SUPERFAMILY Protein kinase-like (PK-like) 9 51 IPR011009 -
Aed6g2076 91 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 9 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2076 Aed-Chr6 23413037 23414199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2076 9 59 Receptor kinase-like Gene Family AT5G49760 48.077 3.02e-10 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed6g2076 Pkinase 5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2076 - - gmx:100816903 79.7221