Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2074 ATGGCAGTAGATCTGGCAGTTGTTACCACCAAGATGAGGATGGAAGAGAATATAGCGATTCAAGAAGCAGCTTCCGCTGGGTTAAAGAGTATGGAGCATCTGATTCGCGTGCTTTCTTCTCAAACCCCTTCTTCTTCTGCTTCGTCTTCTTCTTCACATCATCACCGTCTTAATCTCAACCACCTTGACTGCACGGAAATCACCGACTTCACTGTCTCCAAGTTCAAACAAGTCATCAACTTGTTGAATCGCACCGGCCACGCTCGCTTTCGTCGCGCACCTTCTCATACTTCTCCTTCAATTTCTCCTCCTCAACCTCAACCCCCTGCACTAACTCTTGATTTTGCAAAACCTGTTATGTTAAAGTCAAATCCCAACCCTAACCCTTCTTCTACCGATTTGTCGGTTTCTCAATATTCAAAGACGACCAAGGACACCACCACCTTTAGTATATCCCCTCCCATGTCCACCACCACCTCCTCCTTCATGTCCTCCATCACCGCCGACGGAAGCGTCTCCGACGGCAAGATCGGCCCCGCCATCCTCGCCGCTGGCAAGCCTCCTCTCTCCTCATCCCACCGGAAAAGGTGTCACGACGCCACCCTCTCCGCCGGAAAAGCCTCATCCTCCGCTCACTGCCATTGTTCCAAGAGAAGGAAATCTCGTGTGAAACGAATGATTCGAGTGCCGGCGATAAGTTCTAAGATTGCCGATATCCCAGCGGACGAGTTCTCGTGGAGAAAGTATGGTCAAAAACCAATCAAGGGATCACCCTACCCACGAGCAGATAGGGCTATAAGTTTCAGACATTAG 813 0.5006 MAVDLAVVTTKMRMEENIAIQEAASAGLKSMEHLIRVLSSQTPSSSASSSSSHHHRLNLNHLDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSHTSPSISPPQPQPPALTLDFAKPVMLKSNPNPNPSSTDLSVSQYSKTTKDTTTFSISPPMSTTTSSFMSSITADGSVSDGKIGPAILAAGKPPLSSSHRKRCHDATLSAGKASSSAHCHCSKRRKSRVKRMIRVPAISSKIADIPADEFSWRKYGQKPIKGSPYPRADRAISFRH 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2074 270 MobiDBLite consensus disorder prediction 250 270 - -
Aed6g2074 270 Pfam WRKY DNA -binding domain 242 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g2074 270 SMART WRKY_cls 240 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g2074 270 Pfam Plant zinc cluster domain 194 238 IPR018872 -
Aed6g2074 270 SUPERFAMILY WRKY DNA-binding domain 238 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g2074 270 ProSiteProfiles WRKY domain profile. 235 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g2074 270 MobiDBLite consensus disorder prediction 123 139 - -
Aed6g2074 270 Gene3D WRKY domain 219 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g2074 270 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 262 - -
Aed6g2074 270 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 262 IPR044810 GO:0003700
Aed6g2074 270 MobiDBLite consensus disorder prediction 91 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2074 Aed-Chr6 23391226 23395467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2074 1 261 WRKY Transcription Factor Family AT4G31550 46.865 2.69e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed6g2074 Plant_zn_clust 2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2074 - - gmx:732587 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2074 6 23391226 23395467 Aed6g2074 6 23391226 23395467 ECH
Aed11g1435 11 18892335 18895908 Aed6g2074 6 23391226 23395467 PCT
Aed6g2074 6 23391226 23395467 Aed4g0883 4 8014288 8016467 PCT