Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2057 ATGTCTTCTTCGTGTCTGAGTGGAGCCGGGGGAAGAACCTACGGGTTCGATTTCGAATTTGTTAAATCTCCGTCCTCATCTACTAGAACATCACACACATCTTCACCTTCATCGACAATCTCCGAATCCAGCAATTCGCCTCTAGCAATCTCAACGAAGAAACCCAGAACGCCGCGAAAGAGACCCAACCAAACCTACAATGAAGCCGCGGCGCTTCTCTCCACGGCGTACCCGAATTTGTTCTCCACGAAGAACCTCAAAACGCAGGGCAAAGGCAAATTCACAAGGCCCGCATCGGAGAATTTCGATTACGAGTCCTCGGAGATGTTATTGCCGTTCAGAGTTTTGGACGGCAGTTCGTCGTGTTTTCTTTTGGACCAGACGAGCTCGAAGCCCATGATGGAGAGACCCAAAGTGGTGAGCGTGCAGGAGAAGGCTTGTGGGAGCCCCGGCGAGATAAGCTCCGTAGTGAATTTCAATTCCCTCGAATTAAACGACGACGGTGAAGAGAGCCTCGACGCGGAATCGATTCTAGACGAGGAAATCGAAGAAGGGATCGATAGCATCATGGGGAGCAGCAGGGTCCAGGAGGACTCAAACGACGCCGTTCATAACTTGCCCTGGATACTTCCTTTTGGCGGGAAACTGGACTTCCCGAGACCCCGTGTTAGTGCTCTCCGCCACGTCGACGACGGTAACTGGTGGAATTTTCCGGCCGTCGATATTCTTTTAATATCGCCCAAAATTAACACCAAGCCTCCGCCGCTGGCCGCCGAGAAGAAGACCAAGAAGAAGAAGGTCGTGCCGCCGCCGCCGGAGAAACCGCTCGTCGTGGAGTTGCCCAAACCGAAACAGGGTTTGATGTTGAAATTGAATTTCGACGACGTTCGGAACGCTTGGTCTGACCGCGGAACACCCTTCGCGGATGATAGCCCCCTCGCCGACGTGCCGGAAAATGAGGTCACTCAGGCGCGGCTGTCTCAAATTGATTTGTTGTGGGATAATGGTGGAGTGAGAGAAGCTAGCGTGCTGCGCTACAAAGAGAAGCGGCGAACGCGCCTCTTCTCGAAGAAGATCAGGTACCAGGTCAGGAAAGTCAACGCAGATCGACGGCCCAGAATGAAGGTACGAGTCAGTTGA 1140 0.5307 MSSSCLSGAGGRTYGFDFEFVKSPSSSTRTSHTSSPSSTISESSNSPLAISTKKPRTPRKRPNQTYNEAAALLSTAYPNLFSTKNLKTQGKGKFTRPASENFDYESSEMLLPFRVLDGSSSCFLLDQTSSKPMMERPKVVSVQEKACGSPGEISSVVNFNSLELNDDGEESLDAESILDEEIEEGIDSIMGSSRVQEDSNDAVHNLPWILPFGGKLDFPRPRVSALRHVDDGNWWNFPAVDILLISPKINTKPPPLAAEKKTKKKKVVPPPPEKPLVVELPKPKQGLMLKLNFDDVRNAWSDRGTPFADDSPLADVPENEVTQARLSQIDLLWDNGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKVRVS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2057 379 ProSiteProfiles CCT domain profile. 339 379 IPR010402 GO:0005515
Aed6g2057 379 MobiDBLite consensus disorder prediction 23 63 - -
Aed6g2057 379 MobiDBLite consensus disorder prediction 23 52 - -
Aed6g2057 379 Pfam CCT motif 339 377 IPR010402 GO:0005515
Aed6g2057 379 PANTHER OS02G0148000 PROTEIN 1 376 - -
Aed6g2057 379 MobiDBLite consensus disorder prediction 254 275 - -
Aed6g2057 379 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2057 Aed-Chr6 23276262 23279524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2057 266 377 C2C2-CO-like Transcription Factor Family AT1G25440 38.636 1.87e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed6g2057 CCT 1e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2057 - - gmx:100784788 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2057 6 23276262 23279524 Aed6g2057 6 23276262 23279524 ECH
Aed6g2057 6 23276262 23279524 Aed4g0862 4 7693724 7694725 PCT