Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2054 ATGCGGGATACTGAGAAGAAGTTAAACAACAAAGGATCTAAAAAATCCAGTCCTTTGAAGGTGCGTAAGAAGGGCCAAGGGAAGAAGGATAAAGTGAAAGTGGGATCAAAATCTCATACAAAAAATGTTGGCACTGACATATCAAGGAAGAGAGTTATCTCTTCTATCAAGGTCAAAGGGCCGTATAAGGATTCTTCAGATAAGAAATTGATTACTGGAAAAAATTTGCCAGTGAAGAACAAAAAATCTTCACAGAAGCCATCCTCAAAGTTGCAAGGCAAAAAAGTTTCTCTTAGCTCTAGAAAAGAGGCGAAAGATGCTGACGGAGCAGTAAAGCTTCAAAAAATGAAGAGGAAGAGAAAGAAAAAAAGGCAAAGGAATAATGTGGATCTTGACGATCCTTCACGTCTGCAGAGGAGAACAAGGTATCTTTTAATCAAAATGAAGCTAGAGCAGAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGTCAGAGTCGAGAAAAGATTAGGCCAGAAAAGGAGCTACAACGAGCAAGGAAGCAGATTTTAAAATTTAGACTTGGTATTCGTGACGCCATTCGCCAGTTGGATTCTCTTGGTTCATTCAGTGGCATTGAAGATTCTGCCATTGCTCCAGATGCATTTGTTGACCATGATCATATATTCTGTGTAAAGTGCAAGGTGCGTGAAGAACTTCCAGATAATGATATTATACTATGCAATGGTGCATGCAAGCGTGCTTTTCACCAAAATTGTCTAGACCCTCCTTTGGACACTGAAAATTGTGAGTTCCCTAAGATGGTTTTCACGTTCCTCCTGGAGAGCAGGGTTGGTTTTGTAAATTTTGTGAATATGGAAATACTGGAGGCAACGAATGCTCATCTTGGAACTCACTTCTCCTTGCACAGTACTTGGCAGGATGTATTCAAAGAAGAGGCTGCTATACCTGATGGTGAGACTGGATTACTGAATCCTGAAGAAGAATGGCCATCAGATGATTCCGAAGATGATGATTATGACCCCGAGAGGAAAGAAGAAGGCCACAATATCAACACTAAAGGAACTAATGATAGTGCATCCGACGATTTAAGCAGTTCTACCAGTCTGTGTTCTTCTGATGGTGAATATTCTCCGATAGATGGGGTCAGTCATGAATATTTTTCTGTCAATAGCAGCATAGATTCTGATGAGTCCGAGGACAAAGCCTGCGGTCGTAGGCAGCGAAAAGAAGTTGACTACAAGCAACTTTATGATGAAATGTTTGGGAAAGATGCTCCTGCATATGAACAATTGAGTGAAGATGAAGACTGGGGTCCTGGCAAAAGAAAGCGAAGAGAAAAGGAGTCTGATGCTGTTGATTCTCTCATGACTTTGCATGGAAGCGAGAACATACACCCCAATAATGAGCACAACATGACTAGAAAAGATTCTTCAAGCATAAAGATCAAAAGGCATTGTTTTAGGATTCCACGTGATGCAGTAGAGAAGCTTCGCCAAGTTTTTGCTGAGAATGAACTTCCTCCAAGATCTATAAGAGAGGGTCTTTCAAAAGAGCTGGGACTAAACATTGAGAAGGTAAGCAAATGGTTCAAAAATGCACGTTACTTAGCACTTAAAAACAGAAAGCATCAAGTAGAAGGAGCAGCAGATCAGCTTCAGAGTATCACTCCTACAAAGGACTCCATATTACAAAATCATGAGAATGCTGATCTTTTGAAATCGAAGACCTCGAAAATTACTACGACACGTTCCCAAAAGGATGTTAAAAATGTCACTGGAAGAAAGAAAACAAAGTCATCTAGCAAGGAAAGACAACCAGAAACTCCTCCACCTCCAGGAGAAAATGGCAACAAGGACCTTATGGAGATCAGTGATGATGTGAGCTTGAAGAAACTGTTGAAGAAAAGAAAGAAGAGGTTGGTAAGTTTTACATTTGAAGGAGACTCTCAGGTGGCAGAGTTGGAATTTGAAAGACTAAGCAAACTGAAGACTAAAGTAGATAGTATGAAGCAAAAATTAAGTGCAATTCAAACTTACAGAGTTAAGGGTTCAAATGAACCCCATTCTAATGAACCATCCATTGTATATGTGCCCACAGCTGTGTTAAGGGAAAAGGTTGAATGA 2130 0.4019 MRDTEKKLNNKGSKKSSPLKVRKKGQGKKDKVKVGSKSHTKNVGTDISRKRVISSIKVKGPYKDSSDKKLITGKNLPVKNKKSSQKPSSKLQGKKVSLSSRKEAKDADGAVKLQKMKRKRKKKRQRNNVDLDDPSRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILKFRLGIRDAIRQLDSLGSFSGIEDSAIAPDAFVDHDHIFCVKCKVREELPDNDIILCNGACKRAFHQNCLDPPLDTENCEFPKMVFTFLLESRVGFVNFVNMEILEATNAHLGTHFSLHSTWQDVFKEEAAIPDGETGLLNPEEEWPSDDSEDDDYDPERKEEGHNINTKGTNDSASDDLSSSTSLCSSDGEYSPIDGVSHEYFSVNSSIDSDESEDKACGRRQRKEVDYKQLYDEMFGKDAPAYEQLSEDEDWGPGKRKRREKESDAVDSLMTLHGSENIHPNNEHNMTRKDSSSIKIKRHCFRIPRDAVEKLRQVFAENELPPRSIREGLSKELGLNIEKVSKWFKNARYLALKNRKHQVEGAADQLQSITPTKDSILQNHENADLLKSKTSKITTTRSQKDVKNVTGRKKTKSSSKERQPETPPPPGENGNKDLMEISDDVSLKKLLKKRKKRLVSFTFEGDSQVAELEFERLSKLKTKVDSMKQKLSAIQTYRVKGSNEPHSNEPSIVYVPTAVLREKVE 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2054 709 MobiDBLite consensus disorder prediction 559 622 - -
Aed6g2054 709 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 267 IPR013083 -
Aed6g2054 709 SMART HOX_1 484 546 IPR001356 GO:0003677
Aed6g2054 709 MobiDBLite consensus disorder prediction 590 605 - -
Aed6g2054 709 PANTHER POLYCOMB PROTEIN PCL 6 680 - -
Aed6g2054 709 MobiDBLite consensus disorder prediction 1 134 - -
Aed6g2054 709 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 6 680 - -
Aed6g2054 709 MobiDBLite consensus disorder prediction 16 30 - -
Aed6g2054 709 MobiDBLite consensus disorder prediction 425 453 - -
Aed6g2054 709 MobiDBLite consensus disorder prediction 559 589 - -
Aed6g2054 709 CDD PHD_PRHA_like 224 265 IPR045876 -
Aed6g2054 709 Pfam Homeodomain 493 537 IPR001356 GO:0003677
Aed6g2054 709 MobiDBLite consensus disorder prediction 77 95 - -
Aed6g2054 709 MobiDBLite consensus disorder prediction 96 113 - -
Aed6g2054 709 MobiDBLite consensus disorder prediction 328 342 - -
Aed6g2054 709 Gene3D - 437 536 - -
Aed6g2054 709 SUPERFAMILY FYVE/PHD zinc finger 217 270 IPR011011 -
Aed6g2054 709 ProSiteProfiles 'Homeobox' domain profile. 482 542 IPR001356 GO:0003677
Aed6g2054 709 MobiDBLite consensus disorder prediction 354 376 - -
Aed6g2054 709 MobiDBLite consensus disorder prediction 430 453 - -
Aed6g2054 709 SUPERFAMILY Homeodomain-like 485 548 IPR009057 -
Aed6g2054 709 CDD homeodomain 483 546 IPR001356 GO:0003677
Aed6g2054 709 MobiDBLite consensus disorder prediction 320 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2054 Aed-Chr6 23263109 23267651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2054 127 544 Homeobox Transcription Factor Family AT4G29940 51.402 1.05e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aed6g2054 Homeodomain 6.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2054 - - gmx:100817639 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2054 6 23263109 23267651 Aed6g2054 6 23263109 23267651 ECH
Aed6g2054 6 23263109 23267651 Aed4g0861 4 7685119 7691659 PCT