Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2050 ATGAGTGAATGCATTGGCGTGTATGTGAATCAAGTCAATTGGGATTGGTTAGTGAAAATGAGATTGTTGGAGTTTGGGTGTGCGTTGATTGTTCTATCTGCACTTCTGGTTTCTGGGGATGCTGAGATTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTATGCTGGAGGTATTGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGAGGAAATTGATACCACAAGTGAATTGGTTACTTCTTATGCTCTCCATCTTGAGAAAAAACATGACATGCTTCTGGGGTTGCTGTTTGAGAAAGGGACATACCAGAAACTCTATAGCTATCGACATCTTATAAATGGGTTTGCTGTTCATATTTCACCAGAACAGGCAGAAACTCTAAGACATGCTCCTGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGGAGACTTACAACACATACCCCACAATTTTTAGGGCTTCCAACTGGGGTTTGGCCAACAGAAGGCGGCTTTGATCGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATCTATCCTCATCATCCAAGTTTTGCTACTCATAATTCTGAGCCATATGGGCCAGTTCCAAAGTATAGAGGAAAATGTGAAGCGGATCCAGAAACTAAAAGAAGTTACTGTAATGGGAAGATTGTTGGAGCACAACACTTTGCTCATGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGACTTTGCATCTCCTCTTGATGGGGATGGGCATGGAAGTCATACAGCCTCTATTGCGGCTGGAAATAATGGAATTCCTGTGAGGATGCATGGCCATGAATTTGGGAGAGCGAGTGGGATGGCTCCTCGTGCTAGGATTGCTGTGTACAAGGCACTTTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTTTATGATGGAGTGGATATACTCAGCCTATCAGTTGGACCCGACAGTCCTGCAGCAGCCACCAAAACTACATTTTTGAACCCTTTTGATGCCACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGTGGTCCTTTTCCTAAGACATTGGTTTCATATAGTCCATGGATAGCATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAATCATTTGATCCTTGGAAATGGAAAAACCTTAGCAGGAATTGGGTTATCACCTTCCACACATTTAAACGAAACATACACATTGGTTGCCGCAAATGATGCGTTTCTAGATTCTTCAGTTATGAGGTATAGCCCCACGGATTGCCAGAGACCAGAACTTTTAAACAAGAATTTGATAAAGGGCAATATTCTTCTCTGTGGATATTCCTTCAACTTTGTTGTTGGCACTGCATCGATCAAGAAAGTCTCAGAAACAGCAAAAGCCCTTGGTGCAGTTGGATTTGTTCTCTGTGTTGAAAACATTTCCCCAGGAACAAAATTTGATCCAGTCCCTGTTGGCCTTCCTGGGATTCTCATCACAGATGTCAGCAATTCAAAGGAACTTATAGATTATTATAATAGCACTACACCAAGAGACTGGACTGAGCGGGTAAAGAGTTTCGAAGGTAAAGGCAGAATCGGTGATGGCTTGATGCCTATTCTGCATAAATCTGCACCACAGGTAGCATTGTTATCTGCTCGAGGGCCAAATATAAAGGACTTCAGCTTCCAGGAGGCAGATCTTCTCAAACCAGATTTATTAGCTCCTGGTTCTTTGATTTGGGCTGCTTGGTGTCCAAATGGAACTGATGAGCCAAATTATGTTGGTGAGGGGTTTGCCATGATATCTGGAACCAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAGCATCCTCATTGGAGCCCTGCTGCCATTAAATCAGCTTTGATGACAACATCAACAACTCTAGACAGAGCAGGGAGTCCTCTTCTAGCCCAGCAAACTTCTGAATCAGAAGCTATGAGGCTGGTCAAAGCTACTCCTTTTGATTATGGGAGTGGACATGTTGTTCCAACAGCTGCATTGGACCCTGGGCTCATCTTTGATGCAGGATACAAGGATTATATAGGCTTCTTGTGCACAACACCTGGCATTGATGTTCATGAGATAAGGAACTACACTCACACTCCATGTAACACCACCATGGGCAAACCATCAAATTTAAACACCCCATCTATCACAATTTCCCATCTTGTGCGAACTCAAGTTGTGACTCGCACCGTCACAAATGTTGATGAGGAAGAAACCTATGTGATAACAGCCAGAATGGAGCCAGCGGTTGCCATTGAAGTCAACCCTCCGGCAATGACAATCAAAGCAGGTGCATCACGCCAGTTTTCTGTGTCATTTACAGTGCGCTCGGTGACGGGAAGGTATAGTTTTGGAGAGGTTTTGATGAAAGGGAGCAGAGGGCACAAGGGACAGGGCATGGAGGAAACCAAAGGGAAGGAAGCTAAAATTTATCTGACGAAACCCTTCTCATTGGAAGGTGAATCAAATTTAGAACCGTCTTATAGAGCCCCCAATCTCCTACATCGCTTGTTAACTTTACTCAAGAACCTGCCGCCAGTGTTTAATTTCCCAAAATCTCAACTTCAATGCTATGGTGAATCAGTATACTGCACATCTTCATGTTCCAACTTACTGAGTGAATGCAACAGTGGGCAGAGTCCACTGGAGAGGTTCACATCAGTAGTAGCATGGAGCATATCTACCACACGCCCTACATCTTTTGGTGTTGCTCCTTATAGTCCCACTCTTGGAGAGACCCACCATGTTTCCAATGGCAATCTTAACGTCCTAGTGGAGCAGGTTTCACTCAACCCTCCAGTATCTGCCCTTCATGCAACAGATGAGAAGGAAAACATTGAGATGATATGGTGCCAGCAACCTGTTCCAAAATTTCGTGGTGCATCTATTGAAGCTCAAGTGCATGGTAAACGGCAGCTGAAGCTCCTAAATCATGGGGAAACATATGAAATGAATTGTCCTCACCTTTCAATAAGAATTCTTCCGGTTCCTGGGATTGATTGGGTCGGCAATGTTAATATACGGTGCCCAGAGACAGGTCTGGTAGCTGAAATATCTTACAGATCAAGCTATTCTTTTTTAGGATTTGGGGGAAGTAGTAAATTGATCAAAGGGAAAATCCTCGACTCATCATCATTCAATGTTCTCTACGAAGTTGATGGTCATTGGGATAAGACAGTTGGAGTGAAGGATACAAATAGTGGAGAAGTGAGAGTGATATATGATGCAAAAGAAGTCATTTCAGGGCTCAAAACTCCTATAGTCAAGGATGCGAAGAGTGTGTGGCCAACCGAATCAGCCCTTGTTTGGAGTGAGTTGAGCCAAGCCATCATGAACAAAGATTGGGAAAAAGCAAGAGAAGCAAAGCAAGGTGTGGAAGAAAGACAGAGGAAGATGTTGAGAGAAAGAGACATGAGAGGAGAAACATGGTTTCCTAAGAATTTTAGGGTGTCCTACAGCAAAGACACGTGGGAATGGGACTGTTTTCCAACTCATAAATGGGTCCCTGCGGCCCCCATCATAGCTTAA 3612 0.4385 MSECIGVYVNQVNWDWLVKMRLLEFGCALIVLSALLVSGDAEIYIVTVEGEPIISYAGGIDGFEATAVESDEEIDTTSELVTSYALHLEKKHDMLLGLLFEKGTYQKLYSYRHLINGFAVHISPEQAETLRHAPGVKSVERDWKVRRLTTHTPQFLGLPTGVWPTEGGFDRAGEDIVIGFVDSGIYPHHPSFATHNSEPYGPVPKYRGKCEADPETKRSYCNGKIVGAQHFAHAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVYDGVDILSLSVGPDSPAAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLILGNGKTLAGIGLSPSTHLNETYTLVAANDAFLDSSVMRYSPTDCQRPELLNKNLIKGNILLCGYSFNFVVGTASIKKVSETAKALGAVGFVLCVENISPGTKFDPVPVGLPGILITDVSNSKELIDYYNSTTPRDWTERVKSFEGKGRIGDGLMPILHKSAPQVALLSARGPNIKDFSFQEADLLKPDLLAPGSLIWAAWCPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGSPLLAQQTSESEAMRLVKATPFDYGSGHVVPTAALDPGLIFDAGYKDYIGFLCTTPGIDVHEIRNYTHTPCNTTMGKPSNLNTPSITISHLVRTQVVTRTVTNVDEEETYVITARMEPAVAIEVNPPAMTIKAGASRQFSVSFTVRSVTGRYSFGEVLMKGSRGHKGQGMEETKGKEAKIYLTKPFSLEGESNLEPSYRAPNLLHRLLTLLKNLPPVFNFPKSQLQCYGESVYCTSSCSNLLSECNSGQSPLERFTSVVAWSISTTRPTSFGVAPYSPTLGETHHVSNGNLNVLVEQVSLNPPVSALHATDEKENIEMIWCQQPVPKFRGASIEAQVHGKRQLKLLNHGETYEMNCPHLSIRILPVPGIDWVGNVNIRCPETGLVAEISYRSSYSFLGFGGSSKLIKGKILDSSSFNVLYEVDGHWDKTVGVKDTNSGEVRVIYDAKEVISGLKTPIVKDAKSVWPTESALVWSELSQAIMNKDWEKAREAKQGVEERQRKMLRERDMRGETWFPKNFRVSYSKDTWEWDCFPTHKWVPAAPIIA 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2050 1203 Gene3D - 1120 1168 - -
Aed6g2050 1203 Pfam Peptidase inhibitor I9 44 146 IPR010259 -
Aed6g2050 1203 ProSitePatterns Serine proteases, subtilase family, serine active site. 616 626 IPR023828 -
Aed6g2050 1203 SUPERFAMILY Protease propeptides/inhibitors 105 146 - -
Aed6g2050 1203 Gene3D Peptidase S8/S53 domain 175 706 IPR036852 GO:0004252|GO:0006508
Aed6g2050 1203 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 822 IPR045051 -
Aed6g2050 1203 PANTHER CUCUMISIN-RELATED 33 822 - -
Aed6g2050 1203 SUPERFAMILY Oxysterol-binding protein-like 871 1188 IPR037239 -
Aed6g2050 1203 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 37 147 IPR037045 -
Aed6g2050 1203 Pfam Fibronectin type-III domain 738 818 IPR041469 -
Aed6g2050 1203 PRINTS Subtilisin serine protease family (S8) signature 252 265 IPR015500 -
Aed6g2050 1203 PRINTS Subtilisin serine protease family (S8) signature 615 631 IPR015500 -
Aed6g2050 1203 PRINTS Subtilisin serine protease family (S8) signature 173 192 IPR015500 -
Aed6g2050 1203 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 178 189 IPR023827 -
Aed6g2050 1203 CDD PA_subtilisin_like 395 533 - -
Aed6g2050 1203 Gene3D - 936 1115 - -
Aed6g2050 1203 Pfam Subtilase family 173 658 IPR000209 GO:0006508|GO:0008236
Aed6g2050 1203 SUPERFAMILY Subtilisin-like 148 697 IPR036852 GO:0004252|GO:0006508
Aed6g2050 1203 CDD Peptidases_S8_3 149 652 IPR034197 -
Aed6g2050 1203 Pfam Oxysterol-binding protein 872 1133 IPR000648 GO:0008289
Aed6g2050 1203 Gene3D - 710 824 - -
Aed6g2050 1203 ProSiteProfiles Serine proteases, subtilase domain profile. 142 693 - -
Aed6g2050 1203 Gene3D - 388 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2050 Aed-Chr6 23233656 23244847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2050 23 824 Subtilisin-like Serine Gene Family AT4G30020 79.726 0.0 1333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2050 - - gmx:100787619 1523.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2050 6 23233656 23244847 Aed6g2050 6 23233656 23244847 ECH
Aed6g2050 6 23233656 23244847 Aed4g0853 4 7626460 7632112 PCT