Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2044 ATGGAGAAAAATATGCAGAAGAGTTACTTTGATGTCTTGGGTTTATGCTGCTCCTCGGAGGTTCCTCTTATTGAAAACATCTTGAAACCTCTCCAAGGAATCAAAGAGGTTTCAGTCATCGTTCCATCACGAACTGTCATCGTTGTCCATGACACTCTTGTCATTTCGCAACTTCAAATCGTTAAGGCACTGAATCAAGCCAGGCTAGAAGCTAATGCAAGAGTGTATGGGGACGAAAAGCACCAAAAGAGATGGCCAAGCCCTTACTCAATTGCCTCTGGTGTGCTACTTTTGCTTTCTCTTCTCAAGTTTGTGTTCAATCCCTTAAAATATTTGGCACTAGGAGCAGTTGCTGCGGGCGCCTACCCTATAATCTTAAAGGCCTTTGTGTCCATTCGGAACCTTAGGCTCGACATAAACATTCTCATGATCATAGCAGTTATTGGGACTATTGCTATGAATGATTATTTGGAAGCCGGGACCATTGTTTTCCTCTTCTCAGTTGCAGAATGGCTAGAGTCAAGGGCAAGTCACAAGGCAAATGCAGTAATGTCATCGTTGATGACCATTGCACCTCAAAAAGCAGTCATAGCTGAAACAGGAGAGGTTGTGGATGCTGATGAGGTGAAAATAAACACCATTTTAGCAGTTAAAGCGGGTGAGGTGATACCCATTGATGGAGTTGTTTTAGATGGAACCTGTGAAGTTGATGAGAAAACATTGACTGGGGAATCATTCCCTGTGGCAAAACTAAAGGATTCAACTGTATGGGCTGGCACCATCAATTTAAATGGTTATATTAGTGTGAAAACTACTGCACTAGCTGAGGATTGTGTGGTGGCTAAAATGGCAAAGCTTGTTGAAGAAGCTCAGAACAGCAAAACCAGCATTCAGAGATTGATTGACAAGTTTGCCAAGTTTTATACCCCGGGAGTTGTAATCATATCAAGTCTTGTAGCGGTGATTCCAGTTGCGTTGAGAGTACATAACGTGAAACACTGGCTTCACTTTGCATTGGTTGTTTTAGTAAGTGCATGTCCATGTGCACTCATCCTTTCAACGCCAGTTGCAACTTTTTGTGCTTACACCAAAGCAGCCACATCAGGTCTTCTAATCAAAGGGGGCGATCATCTTGAAACACTTGCAAAAATTAAGGTCGTGGCCTTTGACAAAACGGGTACCATAACGAAGGGTGAATTTGTGGTCACACATTTTCAATCTCTTTCAGATGCCATTGATTTGAACACATTGGTTTACTGGGTGTCAAGCATAGAGAGCAAGTCAAGCCATCCACTGGCAGAGGCAATTGTTGATTATGGAAGGTCTCTCTCCGTTGAACCAGAGCCAGAAAAGGTGACAGAATTTGAAAATTTTCCGGGAGAAGGAATATGTGGGAAAATTCAAGACAGAGTTCTTTACATAGGAAATAAAAAAATTGCCGCAAGAGCTGGGTCTGAAACAGTTCCTATCTTAGAAGGTGAAATTGAAAGAGGAAAGACCACTGGATACATATACTTGGGAACAACCCCAGTTGGATTTTTCTCTCTTTCAGATGCCTGCAGAATAGGGGTTCAGGAGGCAATAGGGAAGTTGAAGTCATTGGGAATCAAAACCGCTATGCTCACCGGAGACTGTCAATCTGCTGCAATTCAAGCACAGGAGCAGCTGGGACATTCTCTGGAGTTAGTCCATGCAGAACTTTTGCCGGAGGACAAGGTGAAAATCATCTCAGAATTTAAGAAGGAAGGTCCAACAGCCATGATTGGAGATGGTTTAAACGACGCACCGGCATTGGCTGCAGCTGATATTGGAATCTCAATGGGAATTTCAGGTTCTGCACTGGCTAGTGAGACAGGCAATATAATTCTTATGTCAAATGACATTAGGAAGATACCAGAAGCCATTAAGCTTGCAAGAAAAGCTCGTAGGAAAGTGATAGAAAACATTGTTTTGTCAATCATGACTAAGGCTGCGATTATTGGTTTGGCCATTGGTGGTCATCCACTTGTTTGGGCAGCAGTTGTGGCTGATGTTGGAACTTGTCTATTGGTTATCTTTAACAGCATGTTACTTCTGCGAAAAGGACACGATCATGGAGGAGGAAAATGTTGTGGACCTTCTGCCAAACCGCATTCGCTCAAAAATGGATGTGGTGACACTCATGGTAGTTCCTCTCATCACCATCATCATGAGCATGATCAACATCAAAATAAGCATGATGAACATCAACCTCATAGCCACAAGGGTGGAATTGTTAACCATTGTAACAACATGAAGGGTCATGATCAATGTAAAAGAGGTGATGAATTCCATGAACATGATCATTGTCATCATGGAAGGTGTGACAAGAATCAAGATGAAGTCCACAAGCATGATGATACTGAAAAGGAGGGTTGTTCAGACTCACACAATTTGATTCTAAATGCAGAAGATAATCATGCAGTTGCAGCAAACATACATGAAAGCCAACAATTTACTCATAACCATTGCCACCTGATCCATGGGTGTGAAAATCTGAAAGACCATGAATCCAAAGATGTTTTAAGATCCAACCATGACATTCAGCTTGAAAAATCAGGATGTCAAGCTGACTTTGAGAAGCATGGGACAAGTGAAATATCCATTGATGTCATCACTGAGGATGCTGAATTAGCCTCAATGCATGGCTGTTCAAGTTTGGAAGTGAAAGAAAAAGGTTCCTGCTGTGAAGGCTGGTCAGACACATGCGAGAAGTTGCCTGCAGTGTGTGGCTGTGAGAGTTCAAATGAGATAAAAGACAGTGCATGTTGCAGAAATGAGGAGGACTCTTCAAAAGAATGCAAGGAATCTCCAATTATGCATGTTTGCCATAGTTTAAATAAGAGAGAGGTTGGTGGATGTTGCAAGAGCTACATGAAGGAATGCTGTGCCAAACTTGGTCACACAAGAGCTGGTTTTGTTGGAGATATCTTCAGCTGGTGTTAG 2964 0.4231 MEKNMQKSYFDVLGLCCSSEVPLIENILKPLQGIKEVSVIVPSRTVIVVHDTLVISQLQIVKALNQARLEANARVYGDEKHQKRWPSPYSIASGVLLLLSLLKFVFNPLKYLALGAVAAGAYPIILKAFVSIRNLRLDINILMIIAVIGTIAMNDYLEAGTIVFLFSVAEWLESRASHKANAVMSSLMTIAPQKAVIAETGEVVDADEVKINTILAVKAGEVIPIDGVVLDGTCEVDEKTLTGESFPVAKLKDSTVWAGTINLNGYISVKTTALAEDCVVAKMAKLVEEAQNSKTSIQRLIDKFAKFYTPGVVIISSLVAVIPVALRVHNVKHWLHFALVVLVSACPCALILSTPVATFCAYTKAATSGLLIKGGDHLETLAKIKVVAFDKTGTITKGEFVVTHFQSLSDAIDLNTLVYWVSSIESKSSHPLAEAIVDYGRSLSVEPEPEKVTEFENFPGEGICGKIQDRVLYIGNKKIAARAGSETVPILEGEIERGKTTGYIYLGTTPVGFFSLSDACRIGVQEAIGKLKSLGIKTAMLTGDCQSAAIQAQEQLGHSLELVHAELLPEDKVKIISEFKKEGPTAMIGDGLNDAPALAAADIGISMGISGSALASETGNIILMSNDIRKIPEAIKLARKARRKVIENIVLSIMTKAAIIGLAIGGHPLVWAAVVADVGTCLLVIFNSMLLLRKGHDHGGGKCCGPSAKPHSLKNGCGDTHGSSSHHHHHEHDQHQNKHDEHQPHSHKGGIVNHCNNMKGHDQCKRGDEFHEHDHCHHGRCDKNQDEVHKHDDTEKEGCSDSHNLILNAEDNHAVAANIHESQQFTHNHCHLIHGCENLKDHESKDVLRSNHDIQLEKSGCQADFEKHGTSEISIDVITEDAELASMHGCSSLEVKEKGSCCEGWSDTCEKLPAVCGCESSNEIKDSACCRNEEDSSKECKESPIMHVCHSLNKREVGGCCKSYMKECCAKLGHTRAGFVGDIFSWC 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2044 987 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 2 937 - -
Aed6g2044 987 ProSiteProfiles Heavy-metal-associated domain profile. 7 73 IPR006121 GO:0046872
Aed6g2044 987 ProSitePatterns Hypothetical cof family signature 2. 588 610 - -
Aed6g2044 987 SUPERFAMILY Calcium ATPase, transduction domain A 202 287 IPR008250 -
Aed6g2044 987 PRINTS P-type cation-transporting ATPase superfamily signature 534 544 - -
Aed6g2044 987 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Aed6g2044 987 PRINTS P-type cation-transporting ATPase superfamily signature 588 607 - -
Aed6g2044 987 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Aed6g2044 987 PRINTS P-type cation-transporting ATPase superfamily signature 612 624 - -
Aed6g2044 987 Gene3D - 2 75 - -
Aed6g2044 987 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 139 691 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aed6g2044 987 MobiDBLite consensus disorder prediction 775 797 - -
Aed6g2044 987 Pfam E1-E2 ATPase 198 366 - -
Aed6g2044 987 PRINTS Copper-transporting ATPase signature 623 637 - -
Aed6g2044 987 PRINTS Copper-transporting ATPase signature 310 324 - -
Aed6g2044 987 PRINTS Copper-transporting ATPase signature 566 583 - -
Aed6g2044 987 PRINTS Copper-transporting ATPase signature 179 197 - -
Aed6g2044 987 MobiDBLite consensus disorder prediction 721 748 - -
Aed6g2044 987 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Aed6g2044 987 Coils Coil 283 303 - -
Aed6g2044 987 SUPERFAMILY HAD-like 386 689 IPR036412 -
Aed6g2044 987 Pfam haloacid dehalogenase-like hydrolase 384 602 - -
Aed6g2044 987 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 2 937 - -
Aed6g2044 987 Gene3D - 379 639 IPR023214 -
Aed6g2044 987 SFLD p-type atpase 371 640 IPR044492 -
Aed6g2044 987 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 382 IPR023298 -
Aed6g2044 987 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 162 666 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed6g2044 987 MobiDBLite consensus disorder prediction 715 752 - -
Aed6g2044 987 SUPERFAMILY HMA, heavy metal-associated domain 3 71 IPR036163 GO:0046872
Aed6g2044 987 CDD P-type_ATPase_HM 122 690 - -
Aed6g2044 987 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 139 480 - -
Aed6g2044 987 Gene3D - 177 291 - -
Aed6g2044 987 SFLD Haloacid Dehalogenase 371 640 - -
Aed6g2044 987 Gene3D - 399 520 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2044 Aed-Chr6 23194154 23204942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2044 3 703 Primary Pumps ATPases AT4G30110 69.801 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2044 K01534 - gmx:100817567 1359.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2044 6 23194154 23204942 Aed6g2044 6 23194154 23204942 ECH