Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2039 ATGGTAGTAACCTTCAAAGCTCGTTACACCGTGAGGCCTGTGGAGACAACATGGCGTAGATCATTCTACTGTCCCCAACACAACATCGATGTCGCTTCCACCTTGAAAGACTCATTAAGCCGAGTTCTAGTGCCCATAAGCCTTGCGTTTTCACATGCCGTTGTGGATGGACTAAGTGCGTTTCACTTTATTAGTGAGTGGGCTAGGCTTGCACGCGGCGAGGAGTCTTTACAAACGGGGCCGTTTCATGACCGGAAAGAGTTGCGTGCCGGGGAGCCTCCTCTGGTGCCACTAACGGAATGTCATGTTCATACGGAGTTCGATGAGCCTCCGTTGTTGCTGGGGCAAACCGAGAACACAGAGGAAAGGAATAAGGAAGCCACAATGGTTATACTCAAACTGAGCAAAACCCAAGTTGAGACATTGAAAAAGAGAGCAAATGAGAAACCTTGTTGTTGTTGTGGCTATAGTCGTTATGAGAGTGTGGCTGGTCACATATGGAGAAGTGCATGCAAGGCGAGGGAGCACAAAGAGGACCAACCAACCGCGCTTACTATTATCGTTGACTCCAGGGGTCGCATGGAACCTCCTTTGCCAGAAGGGTATTTTGACACGGTTGCTACTAGCCTTGCGGGTGATTTGGTGTCGAAGCCGTTGGGGTATGCGTGTAGTAGAATAAGAGAGGCCATTGAGAGGGTCATTGATGAGTACGTTAGGTCGGGGATTGAGTTCTTGAAGAATCAAGAGGATTTGAGAAGGTTTCATCAAGATATTCATGCAGAAGGGAACCCTAATCTGGCTGTGTTGGTTGACATTGCCGATCTATGGCGTCCAGCAACTCATGACTTCGATGGAGATTTTGGGCTTCTTCCTGGTACTGATGGAGATGGATCTTTGTTGGTTGCTGTTGGTCTGCAACTGGTGCATATGAATGTGTTTAAGAAGCATTTTTACGAGGATGCTGCGTAA 969 0.4809 MVVTFKARYTVRPVETTWRRSFYCPQHNIDVASTLKDSLSRVLVPISLAFSHAVVDGLSAFHFISEWARLARGEESLQTGPFHDRKELRAGEPPLVPLTECHVHTEFDEPPLLLGQTENTEERNKEATMVILKLSKTQVETLKKRANEKPCCCCGYSRYESVAGHIWRSACKAREHKEDQPTALTIIVDSRGRMEPPLPEGYFDTVATSLAGDLVSKPLGYACSRIREAIERVIDEYVRSGIEFLKNQEDLRRFHQDIHAEGNPNLAVLVDIADLWRPATHDFDGDFGLLPGTDGDGSLLVAVGLQLVHMNVFKKHFYEDAA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2039 322 Gene3D - 114 319 IPR023213 -
Aed6g2039 322 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 46 320 - -
Aed6g2039 322 Pfam Transferase family 46 253 - -
Aed6g2039 322 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 46 320 - -
Aed6g2039 322 Gene3D - 44 108 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2039 Aed-Chr6 23159084 23160071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2039 46 319 Monolignol Biosynthesis Gene Families AT5G48930 35.959 1.03e-48 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2039 K13065 - gmx:100777532 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2039 6 23159084 23160071 Aed6g2039 6 23159084 23160071 ECH