Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2036 ATGGAAAGTCGTAAGTTTGTGTTGTTGTCTTTGCTTCTTGTCCTGACCAGCAGTACTATAAGCTCAGGTGAACTAAGTGGTAGCTTCTACAAGAACACATGCCCCAATCCAGAGAAGGATCATCCAGATCAAATATCTCTAGCTGGGGATGGGTTTGACACAGTGATTAAAGCAAAGGCAGCTGTTGATAGAGACCCTAAGTGCCGAAACAAAGTCTCTTGTGCTGACATACTTGCTCTCGCTACTAGGGATGTCGTCAATTTGGCTGGGGGACCATTTTATAATGTTGAATTGGGAAGGCGTGACGGCAGAATATCTACTATTGCCAGTGTTCAACGCCATCTTCCTCACCCTGAATTCAATTTGGATCAGCTCAATTCCATGTTTAACTTCAGTGGCCTATCCCAGACAGATATGATTGCATTATCAGGTGCGCATACAATTGGATTCTCTCACTGTAACCGGTTCTCAAAGCGAATCTACAGCTTCAGCCCCAGAAACAGAATCGACCCAACGTTGAATTTACAATATGCATTTCAACTAAGGCAAATGTGCCCCTTAAGGGTTGATCCTACAATTGCCATAAACATGGACCCTGTCACGCCTCAGAAGTTTGACAACCAATACTTCAGGAATCTCCAGAAAGGACAGGGTCTCTTCACTTCTGATCAGGTTCTGTTTACAGATCCAAGGTCAAAGGCCACGGTCAACTTATTTGCATCAAATGAAGGAGCTTTTCAGAAAGCTTTTATTGATGCTATTACTAAGTTGGGAAGGGTTGGTGTTAAAACTGGAAATCAAGGTGAAATTAGGTTTGATTGCACCAGGCCTAACTAG 837 0.4325 MESRKFVLLSLLLVLTSSTISSGELSGSFYKNTCPNPEKDHPDQISLAGDGFDTVIKAKAAVDRDPKCRNKVSCADILALATRDVVNLAGGPFYNVELGRRDGRISTIASVQRHLPHPEFNLDQLNSMFNFSGLSQTDMIALSGAHTIGFSHCNRFSKRIYSFSPRNRIDPTLNLQYAFQLRQMCPLRVDPTIAINMDPVTPQKFDNQYFRNLQKGQGLFTSDQVLFTDPRSKATVNLFASNEGAFQKAFIDAITKLGRVGVKTGNQGEIRFDCTRPN 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2036 278 ProSitePatterns Peroxidases proximal heme-ligand signature. 138 148 IPR019793 -
Aed6g2036 278 PRINTS Haem peroxidase superfamily signature 72 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 PRINTS Haem peroxidase superfamily signature 90 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 PRINTS Haem peroxidase superfamily signature 138 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 SUPERFAMILY Heme-dependent peroxidases 34 278 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 Gene3D - 37 278 - -
Aed6g2036 278 PRINTS Plant peroxidase signature 252 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 PRINTS Plant peroxidase signature 90 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 PRINTS Plant peroxidase signature 50 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 PRINTS Plant peroxidase signature 212 229 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 PRINTS Plant peroxidase signature 196 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 PRINTS Plant peroxidase signature 71 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 PRINTS Plant peroxidase signature 137 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 Gene3D Peroxidase, domain 2 116 257 - -
Aed6g2036 278 ProSiteProfiles Plant heme peroxidase family profile. 10 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 PANTHER - 37 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2036 278 CDD secretory_peroxidase 35 276 IPR033905 GO:0004601|GO:0042744
Aed6g2036 278 PANTHER PEROXIDASE 16-RELATED 37 278 - -
Aed6g2036 278 Pfam Peroxidase 35 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2036 Aed-Chr6 23129739 23130881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2036 6 278 Peroxidase AT2G18980 61.950 1.39e-137 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2036 K00430 - gmx:100804620 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1471 11 19127416 19129812 Aed6g2036 6 23129739 23130881 PCT
Aed6g2036 6 23129739 23130881 Aed4g0829 4 7179924 7182633 PCT