Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2032 ATGGCGGCTGACAAGGCAGCAATCAGCCTCGAAGAAATCAAGAATGAGACCGTTGATCTGGAACGTATTCCTATTGAGGAAGTGTTCCAGCAATTGAAATGTTCCAGAGAAGGATTGTCCTCGGACGAAGGAGCCAATCGGCTTCAAATATTTGGGCCAAACAAGCTAGAGGAGAAAAAGGAAAGCAAAGTTCTAAAGTTTCTTGGGTTCATGTGGAATCCTCTGTCATGGGTGATGGAAGCTGCAGCTATTATGGCAATTGCTCTTGCAAATGGGGATGGGAAGCCCCCAGATTGGCAAGATTTTGTGGGTATTATTTGCTTGTTGGTGATCAACTCCACCATCAGTTTCATTGAAGAAAACAATGCTGGTAATGCAGCTGCTGCTCTTATGGCTGGTCTTGCTCCTAAGACTAAGATTGCTACAATCATAGCAGTATATGCCAACTGGGGCTTTGCAAAGGTTCAAGGAATTGGTTGGGGTTGGGCAGGAGTCATATGGCTCTACAGTGTTGTCTTCTATATTCCACTTGATGTCATGAAGTTTGCCATCCGTTACATATTGAGTGGCAAGGCATGGCTAAACCTACTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTACGGTAAGGAGGAGAGGGAAGCTCAGTGGGCTCATGCTCAGAGGACCCTGCATGGACTTCAACCACCGGAACCTTCTGGCGGCATTTTCAATGAGAAGAACAGTTATAGAGAGCTCTCTGAGATTGCTGAGCAGGCCAAGAGAAGAGCTGAAGTTGCAAGGCTTCGTGAGCTTCACACACTGAAGGGACATGTTGAGTCTGTGGTGAAGCTGAAGGGTTTGGACATTGATACAATCCAGCAGCATTACACAGTGTGA 882 0.4626 MAADKAAISLEEIKNETVDLERIPIEEVFQQLKCSREGLSSDEGANRLQIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGDGKPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKIATIIAVYANWGFAKVQGIGWGWAGVIWLYSVVFYIPLDVMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWAHAQRTLHGLQPPEPSGGIFNEKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2032 293 Coils Coil 244 264 - -
Aed6g2032 293 PANTHER PLASMA MEMBRANE ATPASE 140 274 - -
Aed6g2032 293 PANTHER PLASMA MEMBRANE ATPASE 2 140 - -
Aed6g2032 293 Gene3D - 242 293 - -
Aed6g2032 293 PANTHER CALCIUM-TRANSPORTING ATPASE 2 140 - -
Aed6g2032 293 SUPERFAMILY Calcium ATPase, transmembrane domain M 19 136 IPR023298 -
Aed6g2032 293 SMART Cation_ATPase_N_a_2 19 91 IPR004014 -
Aed6g2032 293 PANTHER CALCIUM-TRANSPORTING ATPASE 140 274 - -
Aed6g2032 293 Pfam Cation transporter/ATPase, N-terminus 23 85 IPR004014 -
Aed6g2032 293 Gene3D - 140 187 - -
Aed6g2032 293 Gene3D - 70 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2032 Aed-Chr6 23104362 23112277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2032 140 293 Primary Pumps ATPases AT2G24520 83.766 2.36e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2032 K01535 - gmx:100816905 301.597