Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2025 ATGGATTCCTTTTCTCTTCTACAATTTCAAGCATCTATTCTCGGTTCGAACAAGTTTTGGGCTTTTGGTGGCCTTGCACTTGATCCTTCTAAGTGCAGTAAGTTGAGTATGGAGGAAAAAAGAGAACTTGTATATGAAGTATCTAAGTGGTCGCATGGTGCATCGGAGGTGCTGCAGTCATGGAGCCGTCAAGAGATTTTGCAAATATTGTGTGCAGAAATGGGGAAAGAGAGAAAGTATACTGGCTTGACAAAGTTGAAAATTATAGAAAATCTTTTAAAAATTGTTTCTGAGAAGAAATCAGGGGGGAACGAAATTGCTGCTGACCCTGAACCACAATCTTCTCCTGCACCTGGTCAGAAGCCTGCTAAAAGGCAGAGAAAATCTGAGAATCCTTCACACGTACCACCTGTTCCTGCGACCAGTGTTTCAGTCAATATTGGTGGTGATTCTGTTAATACCACATACTGCAAAAACTCAGCTTGCAAAGCTACCCTGAATCAATCAGATGCATTTTGCAAAAGATGTTCATGCTGCATTTGTCATCAATATGATGACAACAAAGACCCTAGCCTGTGGTTAATATGTAGTTCTGAGAGTCCATTTCCTGGTGTTTCTTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGATGGTTCAGGAATTGGCAAGGATGGTGAGCGTCCCAAGCTTGATGGAGGCTTCTACTGTGTCTCTTGTGGGAAATTAAATGATTTACTCGGATGCTGGAGAAAACAACTGATGGTAGCAAAGGATACTAGACGCGTAGATATACTCTGTTATCGTGTCTCCTTAAGCCAAAGACTTTTACAAGGAACTGAAATGTATGAAGAACTTAATAAAATTGTTGATGAAGCAGTGACGAAACTTGAACCTGAAGTGGGTCCACTCATTGGCTCACCAGTGAAGATTGGTAGAGGGATTGTGAACAGGCTTTCGTCGGGACCTGAGGTTCAGAAACTCTGTGGTTTTGCTCTGGAATCACTTAATTCACTGCTTTCGAAAAGGATCTTGCCTTCGCCACCCAATCAAACAACTCAAGATGCACATTTGCTGGCTCCAAATATGGTGCGGTTTGAAAATGTCACTGCCACATCCCTCACTATTATTTTGGGTTCTGAAGAACCCTCTGGTGAAAATATTGCTGGTTACACCTTGTGGCATCGCAAAGCTGATGATATGGACTATCCTACGGACCCGACTTGCACCTTGCTCCTACCAAATAGAAGGTTCAGTGTCTCGGCTCTAATTCCAGGTACAGAATACAGTTTCAAAGTTGTTTCCAATGATTCGGGTGAGTCAGGTATGTGTGAAGTTCAAGTCTCAACAGAGCATGGCGAGGATGAAGTTCAAGTCTCAGCAACAGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGCCTTTCCAATCCATCCTCAGTGGAAGATGAAACTAATAACAATCCATATAGTGACCTGACTGATAACCGAGCAGACCATTATCCTTCGTATCACAAGGATGGCGACCAGCTTGCTTCTGGAAATTTATCCAATGATGCTATTAACTGTTTGAGTCTAGGCGGTGCAGGACTTCTTCCCGATGCAGATTCTTTGTCAGACAAGCAGCATGCTGGAGGAATAACTGCATCCATACCCAGTTCTGATGTGCTGAAGCTTGAAAACAAGCATTCACTGGAGGAACAACTCACTGAGGACATGAGCACTGATGATAGGTTGAATTCCCCAGCTCTAACGGGGAGGGAATGTGTGCCGTTGGTGGGTAGCTCGGAAGGAGGCTTGCCTAATACTCCCTGCAAGTTGGAAACACTTAAGGATGGACCTGGAAAGAATAAAAGATCTAAGTCCAGTGGTAAAGATCAAGAAAATGTATCCGGGAAAAGGGAGGGCCCCCAAGATGGAAGCACATCGAATAAGAGGAGTGGAGAAAGGCCAGAGGAGGGCCGTGTCGCAAATGGCTTTTCGGATCACGATTTTGAGTATTATGTGAAGATGATTAGGTGGTTAGAGTGTGAAGGACACATAGAAAAGAACTTCAGGCAGAAGTTTCTGACTTGGTACAGCTTAAGAGCCACCCTTCAAGAAGTAAGGATTGTGAAAATATACATTGATACATTTCGTGAAGATCCAGCTTCTCTTGCAGAGCAACTTGTAGACACCTTCACAGAATGTATATCCATATCCAGCAAGAGAACATCAGTGGTGCCAGCGGGGTTCTGCATGAAGCTTTGGCATTGA 2262 0.4377 MDSFSLLQFQASILGSNKFWAFGGLALDPSKCSKLSMEEKRELVYEVSKWSHGASEVLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGNEIAADPEPQSSPAPGQKPAKRQRKSENPSHVPPVPATSVSVNIGGDSVNTTYCKNSACKATLNQSDAFCKRCSCCICHQYDDNKDPSLWLICSSESPFPGVSCGLSCHLECALKHDGSGIGKDGERPKLDGGFYCVSCGKLNDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRLLQGTEMYEELNKIVDEAVTKLEPEVGPLIGSPVKIGRGIVNRLSSGPEVQKLCGFALESLNSLLSKRILPSPPNQTTQDAHLLAPNMVRFENVTATSLTIILGSEEPSGENIAGYTLWHRKADDMDYPTDPTCTLLLPNRRFSVSALIPGTEYSFKVVSNDSGESGMCEVQVSTEHGEDEVQVSATERSQSPVTNCSSLSNPSSVEDETNNNPYSDLTDNRADHYPSYHKDGDQLASGNLSNDAINCLSLGGAGLLPDADSLSDKQHAGGITASIPSSDVLKLENKHSLEEQLTEDMSTDDRLNSPALTGRECVPLVGSSEGGLPNTPCKLETLKDGPGKNKRSKSSGKDQENVSGKREGPQDGSTSNKRSGERPEEGRVANGFSDHDFEYYVKMIRWLECEGHIEKNFRQKFLTWYSLRATLQEVRIVKIYIDTFREDPASLAEQLVDTFTECISISSKRTSVVPAGFCMKLWH 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2025 753 CDD FN3 362 443 IPR003961 GO:0005515
Aed6g2025 753 MobiDBLite consensus disorder prediction 613 635 - -
Aed6g2025 753 Pfam Fibronectin type III domain 362 437 IPR003961 GO:0005515
Aed6g2025 753 PANTHER VIN3-LIKE PROTEIN 2-RELATED 24 753 - -
Aed6g2025 753 MobiDBLite consensus disorder prediction 103 146 - -
Aed6g2025 753 MobiDBLite consensus disorder prediction 463 512 - -
Aed6g2025 753 PANTHER VIN3-LIKE PROTEIN 2-RELATED 24 753 IPR044514 GO:0010048|GO:0040029
Aed6g2025 753 Pfam PHD - plant homeodomain finger protein 157 276 IPR032881 -
Aed6g2025 753 ProSiteProfiles Fibronectin type-III domain profile. 362 457 IPR003961 GO:0005515
Aed6g2025 753 SUPERFAMILY Fibronectin type III 355 442 IPR036116 GO:0005515
Aed6g2025 753 CDD PHD_VIN3_plant 177 242 - -
Aed6g2025 753 Gene3D Immunoglobulins 359 464 IPR013783 -
Aed6g2025 753 MobiDBLite consensus disorder prediction 463 496 - -
Aed6g2025 753 MobiDBLite consensus disorder prediction 591 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2025 Aed-Chr6 23029672 23035177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2025 21 505 PHD Gene Family AT4G30200 54.423 2.11e-165 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2025 - - gmx:100794721 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2025 6 23029672 23035177 Aed6g2025 6 23029672 23035177 ECH