Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2004 ATGGACGAGTTCATTTTCCGTTCTAAACTCTCCGACATTTACATCCCAACGCACCTTCCTCTCCACACTTACATCTTCCAAAACCTCTCCCTATTCAAAGACCGTCCCTGCCTCATCAACGCCGCCACCGGCGAAACCTTCTCCTACGCCGCCGTCGAACTCACCGCCCGCAAAGTCGCCGCAGGCCTCAGCAAACTCGGCATTCAAAAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCACACAATTCGTCTTCACATTCCTTGGCGCCTCCTACCTCGGCACCACCATCACCACCGCCAATCCCTTCTACACTCCGGCGGAGGTGGCGAAACAAGCCATTACCTCCAACTCCAAACTCATCATAACGCAAGCTTACTACGTGGATAAAGTCAAGGATTTCGCGAGAGAACACGACGTCAAGGTGATGTGCATTGACGTAGCTCCCGAAGGTTACCTGCACTTCTCGGAGTTAACGGAGGCCAACGAGGGAGACATTCCCGCCGTTAAAATTTATCCAGACGACGTCGTTGCGCTGCCGTATTCTTCTGGCACCACGGGGCTTCCGAAGGGAGTGATGCTAACGCACAAGGGACTCGTTACGAGCGTGGCGCAACAGGTTGATGGAGAGAACCCTAATCTGTATTTTCGGAGCGACGATGTGGTCGTGTGCGTGCTCCCACTTTTCCACATTTATTCCCTCAACTCTGTTTTGCTCTGTTCCCTTCGGGTTGGGGCTGCCGTTTTGATCGTGCCGAAATTTGAGATCGTTACGTTGCTGGAGTTGGTGCAGAAACACAAGGTCAGCGTCGCGCCGTTTGTGCCGCCAATCGTTTTGGCCATTTCTAAAAGTCCGGATTTGGAGCGATACGACCTGTCGTCGATTCGGATTATCATGTCCGGCGCCGCATCCATGGGAAAGGAGCTTGAGGATTCTGTCAGGGCTAAGCTTCCCAAAGCCACACTTGGACAGGGTTATGGGATGACAGAGGCAGGACCAGTGCTATCAATGTGCTTAGCGTTTGCGAAGGAGCCAATGCTGGTGAAATCAGGTGCATGTGGGACCGTCGTAAGAAATGCGGAGATGAAAATCATTGACCCAGATACTGCCACTTCGCTCCATAGGAATCAACCCGGTGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGTTACCTGAATGACCAAGAGGCCACAGAAAGAACTATAGACAAAGGAGGATGGTTGCACACAGGTGATATTGGATACATTGATGATAATGATGAGCTCTTCATCGTTGATCGGTTAAAGGAGTTGATCAAATATAAAGGATTTCAAGTGGCTCCAGCTGAGCTTGAAGCCATGCTAATTGCTCATCCTAACATTTCTGACGCTGCCGTTGTATCCATGAAGGATGAAGTTGCAGGAGAGGTTCCAGTTGCATTTGTTGTACGATCAAATGGGTTTAAGATTTCCGAGGATGAAATAAAGCAATTCATCTCAAAGCAGGTTGTGTTTTACAAAAGAATTAGTAGAGTTTTCTTTGTGGGCTCAATACCAAAGGCACCCTCTGGAAAGATCTTGAGGAAAGACCTCAGGGCCAGGCTCGCAAACGATCTTGCTATTTTGGGTTAA 1617 0.4972 MDEFIFRSKLSDIYIPTHLPLHTYIFQNLSLFKDRPCLINAATGETFSYAAVELTARKVAAGLSKLGIQKGDVILLLLQNCTQFVFTFLGASYLGTTITTANPFYTPAEVAKQAITSNSKLIITQAYYVDKVKDFAREHDVKVMCIDVAPEGYLHFSELTEANEGDIPAVKIYPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFRSDDVVVCVLPLFHIYSLNSVLLCSLRVGAAVLIVPKFEIVTLLELVQKHKVSVAPFVPPIVLAISKSPDLERYDLSSIRIIMSGAASMGKELEDSVRAKLPKATLGQGYGMTEAGPVLSMCLAFAKEPMLVKSGACGTVVRNAEMKIIDPDTATSLHRNQPGEICIRGNQIMKGYLNDQEATERTIDKGGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDAAVVSMKDEVAGEVPVAFVVRSNGFKISEDEIKQFISKQVVFYKRISRVFFVGSIPKAPSGKILRKDLRARLANDLAILG 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2004 538 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 2 530 - -
Aed6g2004 538 Gene3D - 431 535 IPR045851 -
Aed6g2004 538 CDD 4CL 15 526 - -
Aed6g2004 538 ProSitePatterns Putative AMP-binding domain signature. 180 191 IPR020845 -
Aed6g2004 538 Gene3D - 1 430 IPR042099 -
Aed6g2004 538 SUPERFAMILY Acetyl-CoA synthetase-like 12 532 - -
Aed6g2004 538 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 530 - -
Aed6g2004 538 Pfam AMP-binding enzyme 32 436 IPR000873 -
Aed6g2004 538 Pfam AMP-binding enzyme C-terminal domain 445 520 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2004 Aed-Chr6 22887662 22891109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2004 3 498 Monolignol Biosynthesis Gene Families AT1G51680 70.099 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2004 K01904 - gmx:100779668 961.444