Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2003 ATGGAAGAGCAACAGCCCCACCATGACTTCATTTTTCGTTCCAAACTCCCGGACATTTACATCCCAACGCACCTCCCTCTCCATACTTATATTTTTCAAAATCTCTCATTATTCAAAGGCCGTCCCTGCCTCATCAATGCCGCCACCGGCGGGACCTTCTCCTACGCCGCCGTCGAACTCACCGCGCGCAAAGTCGCCGCCGGTCTCAACAAACTCGGCATCGAGAAAGGCGACGTAATCCTCCTCCTCCTCCAGAACTGCACACAATTCGTCCTCGCATTCCTCGGCGCCTCCTACCGCGGCGCCACCGTCACCGCCGCCAACCCCTTCCACACTCCAGAGGAGGTGGCCAAGCAAGCCGCGGCGTCCAACTCCAAACTCATCATAACGCAAGCTTCCTACGTGGACAAAGTCAAGGATTTCGCGACAGAATACGACGTTAAAGTGATGTGCATTGACGCGGCCCCGGAAGGTTACCTGCACTTCTCGGAGTTAACGGAGGCCGACGAGACTGAAATTCCCGCCGTTAGTATTTCACCAGACGACGTCGTTGCGCTGCCGTATTCGTCTGGCACGACTGGGCTCCCGAAGGGAGTGATGCTAACGCACAAGGGACTCGTTACGAACGTGGCGCAACAGGTTGACGGAGAGAACCCTAATTTGTATTTTCGGAGCGACGATGTGGTTTTGTGCGTGCTTCCACTTTTCCACATTTATGCGCTGAACTCTATTTTGCTCTGTTCCCTTCGAGTAGGTGCCGCTGTTTTGGTGGTGCCGAAATTTGAGATGAAGACATTGTTGGAGTTGGTCCAGAAACACAAGGCAAGCATCGCGCCGTTTGTGCCGCCCGTCGTTTTGGCGATTGCAAAGAGAGCTGATTTGAATCGATACGACTTGTCGTCGATTAGGGTGATTATGTGCGGTGCGGCACCCATGGGTAAGGAACTTGAGGATTCTGTGAGGGCCAAACTTCCCAACGCCATACTCGGACAGGGTTACGGAATGACAGAGGCAGGGCCAGTGCTATCAATGTCCTTGGCGTTTGCAAAGGAGGCAATGGAGGTGAAATCAGGTGCGTGCGGGACTGTAGTAAGAAATGCGGAGATGAAGATCCTTGACCCTCACACGGGTGCTTCACTTCTTAGGAATCAACCTGGTTATCTAAATGATCAAGAGGCCACAGAAAGAACTATAGACAAGGAAGGATGGTTGCATACAGGCGATGTTGGTTACATTGACGACAATAATGAGCTTTTCATCGTTGATCGGTTAAAGGATCTTATTAAATACAAAGGATTCCAAGTTGCTCCAGCTGAGCTTGAAGCCATCTTAATTGCTCACCCAGCCATTTCTGATGCTGCTGTTGTGTCCATGAAGGATGAAGTTGCAGGAGAAGTTCCTATTGCATTCGTTGTACGATCACATGGTTCTAAGATCTCTCAAGATGAAATCGTGCAATACATCTCCAAGCAGGTTGTGTTTTACAAAAGAATCGGCATGGTTTTCTTTGTGGACTCAATTCCGAAGGCTCCTTCCGGAAAGATCTTGCGGAAAAACCTTAGGGCGAGGTTCTGA 1575 0.506 MEEQQPHHDFIFRSKLPDIYIPTHLPLHTYIFQNLSLFKGRPCLINAATGGTFSYAAVELTARKVAAGLNKLGIEKGDVILLLLQNCTQFVLAFLGASYRGATVTAANPFHTPEEVAKQAAASNSKLIITQASYVDKVKDFATEYDVKVMCIDAAPEGYLHFSELTEADETEIPAVSISPDDVVALPYSSGTTGLPKGVMLTHKGLVTNVAQQVDGENPNLYFRSDDVVLCVLPLFHIYALNSILLCSLRVGAAVLVVPKFEMKTLLELVQKHKASIAPFVPPVVLAIAKRADLNRYDLSSIRVIMCGAAPMGKELEDSVRAKLPNAILGQGYGMTEAGPVLSMSLAFAKEAMEVKSGACGTVVRNAEMKILDPHTGASLLRNQPGYLNDQEATERTIDKEGWLHTGDVGYIDDNNELFIVDRLKDLIKYKGFQVAPAELEAILIAHPAISDAAVVSMKDEVAGEVPIAFVVRSHGSKISQDEIVQYISKQVVFYKRIGMVFFVDSIPKAPSGKILRKNLRARF 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2003 524 Pfam AMP-binding enzyme C-terminal domain 439 514 IPR025110 -
Aed6g2003 524 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 523 - -
Aed6g2003 524 Gene3D - 5 424 IPR042099 -
Aed6g2003 524 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 7 523 - -
Aed6g2003 524 CDD 4CL 21 520 - -
Aed6g2003 524 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Aed6g2003 524 Pfam AMP-binding enzyme 38 430 IPR000873 -
Aed6g2003 524 Gene3D - 425 524 IPR045851 -
Aed6g2003 524 SUPERFAMILY Acetyl-CoA synthetase-like 8 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2003 Aed-Chr6 22884063 22886890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2003 1 492 Monolignol Biosynthesis Gene Families AT1G51680 66.990 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2003 K01904 - gmx:100780741 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2003 6 22884063 22886890 Aed6g2003 6 22884063 22886890 ECH