Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1985 ATGAAACTTCTCCATCATCCAAACATAGTTAGTATTCACGAGGTTATTGGCACAAAAACGAAGATATACATTGTGATGGAATATGTTTCAGGAGGACAGCTATTAGACAAGATATCCTATGGAGAGAAGTTGAATGAGTGTGAGGCAAGAAAACTATTTCAGCAACTTATCGATGCCCTGGACTACTGCCATAACAAAGGGATTTATCATCGAGATCTCAAGCCAGAAAACTTGCTTCTTGACAGCAAGGGAAATCTCAAAGTGTCTGATTTTGGATTAAGTGCATTGCAAAAGCATAACGATGTCTTAACCACACAGTGTGGATCCCCATGCTATGTGGCACCTGAGCTGCTACTGAGCAAGGGGTATGATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAATTACTTGCAGGCTATTTACCATTTAACGACCGGAATTTGATGAACTTATATGGAAAGATATGGAAGGCAGAATATAAATGTCCCCCATGGTTTACTCAAAGTCAAAAGAAACTAATTGCCAAAATACTTGAACCACGCCCTTTAAAGCGGATAACTATATCAGATATTGTTGAAGATCAGTGGTTTCAAACAGATTACAAGCCTACTTTTGCATTCGAATTTGATCAGAACATTAACTTGGATGGTGTTGATGGTGCTTTCAATTTAATTAAGGAGAATATCAGAGAGTCGATGATACCTAAGTCCTCAAGTTTCATTAATGCGTTTCAACTAATAGCCATGTCTCAGGACCTTGATCTATCTGGCCTTTTTGAAGAACAGGATGACAAAAAGCAGAGAACAAGGCTGGGATCCAAACACACCGTCAATGAAACTATAGAAAAAATAGAAGCTGCTGCAACATATGTAAGACTGTCAGTAGAAAAAATGAACAACTTTAAGATTAAAATGCAACAGAAACAGATAATGACTAGGTGTTCTAGATCATACCTATCAGCCCAGAGAGTTCAATTTTTCCGGTATATGTGTGACAATTATCAGGTGATTGAAGTAGCTCCAACTCATTGTGTTGTAGAAATATCCAAATCTACTGGAGATATAAGAGTATACAACAAATTTTGTGATAGTCTATCAAATCTTCTGAAACAAAAACCCGATGTGCCATCACAAAGCCAAGATTTTGTAGATTCATGTGCTGGTGATAGTAAAAAACAAGATGCTGGATGCTATGAAGATCCTAAAAGTGAAGATAGAAAACTTCTGTGTGGCTATAAATCTGCTTAA 1260 0.377 MKLLHHPNIVSIHEVIGTKTKIYIVMEYVSGGQLLDKISYGEKLNECEARKLFQQLIDALDYCHNKGIYHRDLKPENLLLDSKGNLKVSDFGLSALQKHNDVLTTQCGSPCYVAPELLLSKGYDGAAADVWSCGVILFELLAGYLPFNDRNLMNLYGKIWKAEYKCPPWFTQSQKKLIAKILEPRPLKRITISDIVEDQWFQTDYKPTFAFEFDQNINLDGVDGAFNLIKENIRESMIPKSSSFINAFQLIAMSQDLDLSGLFEEQDDKKQRTRLGSKHTVNETIEKIEAAATYVRLSVEKMNNFKIKMQQKQIMTRCSRSYLSAQRVQFFRYMCDNYQVIEVAPTHCVVEISKSTGDIRVYNKFCDSLSNLLKQKPDVPSQSQDFVDSCAGDSKKQDAGCYEDPKSEDRKLLCGYKSA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1985 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 68 80 IPR008271 GO:0004672|GO:0006468
Aed6g1985 419 PANTHER SERINE/THREONINE KINASE 1 378 - -
Aed6g1985 419 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1985 419 ProSiteProfiles NAF domain profile. 240 264 IPR018451 GO:0007165
Aed6g1985 419 SMART serkin_6 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1985 419 Pfam Protein kinase domain 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1985 419 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 1 378 - -
Aed6g1985 419 Pfam NAF domain 243 301 IPR004041 GO:0007165
Aed6g1985 419 Gene3D Kinase associated domain 1, KA1 240 376 - -
Aed6g1985 419 MobiDBLite consensus disorder prediction 377 408 - -
Aed6g1985 419 Gene3D Transferase(Phosphotransferase) domain 1 34 220 - -
Aed6g1985 419 Gene3D Phosphorylase Kinase; domain 1 1 33 - -
Aed6g1985 419 CDD CIPK_C 246 375 - -
Aed6g1985 419 SUPERFAMILY Protein kinase-like (PK-like) 1 202 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1985 Aed-Chr6 22763296 22765824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1985 26 373 CBL-interacting serine-threonine protein kinases AT5G57630 59.714 5.20e-146 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed6g1985 Pkinase 7.2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1985 - - gmx:100786097 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1985 6 22763296 22765824 Aed6g1985 6 22763296 22765824 ECH