Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1978 ATGGGATCCTCCTTCAGCAGTTGCTGCGGCCCAGAGAGGGTCGAAGAAGTGCCAACAACATCATTTGGCGTGGTTCACAATTCATGGAGAATATTCACATACAAGGAGTTGCATGCGGCCACCAACGGATTCAGTGATGATAACAAGCTTGGTGAAGGTGGTTTTGGAAGTGTCTATTGGGGAAGAACCAACGATGGTCTTCAGATAGCGGTGAAGAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAGTTTGCTGTAGAAGTTGAAGTTCTTGGAAGGGTTAGGCATAAGAACTTGCTGGGTCTTAGGGGCTATTGTGTTGGGGATGATCAACGGCTTATAGTCTATGATTACATGCCAAATCTCAGCTTGCTTTCTCATCTCCATGGCCAGTTTGCTGTTGAAGTGCAACTCAACTGGCAAAGGAGAATCAACATTGCAATTCGCTCTGCCGAAGGCCTTCTGTGA 471 0.465 MGSSFSSCCGPERVEEVPTTSFGVVHNSWRIFTYKELHAATNGFSDDNKLGEGGFGSVYWGRTNDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQFAVEVQLNWQRRINIAIRSAEGLL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1978 156 PANTHER OS01G0750732 PROTEIN 1 156 - -
Aed6g1978 156 Coils Coil 64 84 - -
Aed6g1978 156 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 156 - -
Aed6g1978 156 Gene3D Phosphorylase Kinase; domain 1 16 119 - -
Aed6g1978 156 Pfam Protein tyrosine and serine/threonine kinase 47 155 IPR001245 GO:0004672|GO:0006468
Aed6g1978 156 ProSiteProfiles Protein kinase domain profile. 44 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1978 156 SUPERFAMILY Protein kinase-like (PK-like) 21 155 IPR011009 -
Aed6g1978 156 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1978 Aed-Chr6 22708402 22709024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1978 32 155 Trihelix Transcription Factor Family AT1G70460 51.613 4.22e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Aed6g1978 PK_Tyr_Ser-Thr 1.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1978 - - gmx:100783365 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1978 6 22708402 22709024 Aed6g1978 6 22708402 22709024 ECH