Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1975 ATGGCTGAGTGCGTCTCATTCCCTCTCTCTCTTTTTCTGATTTGTTTACTCACGGGGAATGGGTCAAATGCAAAACTAGTACCGGATTCGGAAGTAATCAAGTTGAGAGTAGGGGTACCAAAGAAAGACGGTTTCCGCCAATTTGTGAATGTAGACCAAAACTACAACGTGTCTGGATATTGCATGGATGTTTTCAATGCCGTTGTAACCCGCTTACCTTTCAAGGTTTCTCTACTTGTTCAACAACCTTATGATATCGAATCAACTCACGTTTCTGGAACATACGATGCACTTCTCCATCATATCCCAGCAAAGCTTCGACCCAGTTTTCTGAACGTAAATGATCTGAGAAAAGGGGGTTATTATGTTGGATATCAAACCGGATCTTTCGTTAAAGATGTGTTGGTTCAACAATTTAAGTTTGACCCATCGAAGCTGAGGCCATACAACAGAAGTTGTGATTATCATGATGCTTTAAAAAAGGGAAGCGAAGGAGGGGGTGTTGCAGCTATGTTCGATGAATTGCCTTACCTTAAAGTGTACCTTCAAGAATACGGATCCGATTACATCTTGTCCGGCCCCAGATATAGAAATGCTGGCTTTGGTTTTGCATTCCCTTTGAACTCCAATCTGACGGCTTACTTTTCTCGGGCCATATTGAATGTGACTGAAAGTGATTTAATGAAAGAAATAGAGGAAAAATATTTTGGGAAGAATGATGATATAGGAGGAGGAGGAGAGTCATCGTCTGCGGAAATGTCTTCTTCTGCTACAGCTCTAAGTCTGAACTTTCATAGTTTTGAAGGGTTATTCTTGATTACAGGGATTTGTACTTTGATAGGGCTGTTGGTCTCAGAAACTGTTATTTGGCAAAGGCCCATTTTGCTGGCTAAGGCATACAGTCACAAGTTTTTGTTCTCCACTCCACCACCTTCTCCACAAACACGCGTCCATCCAACTCAAGATTCAACGCACGGAATAGAGGCCGTTTAA 993 0.4189 MAECVSFPLSLFLICLLTGNGSNAKLVPDSEVIKLRVGVPKKDGFRQFVNVDQNYNVSGYCMDVFNAVVTRLPFKVSLLVQQPYDIESTHVSGTYDALLHHIPAKLRPSFLNVNDLRKGGYYVGYQTGSFVKDVLVQQFKFDPSKLRPYNRSCDYHDALKKGSEGGGVAAMFDELPYLKVYLQEYGSDYILSGPRYRNAGFGFAFPLNSNLTAYFSRAILNVTESDLMKEIEEKYFGKNDDIGGGGESSSAEMSSSATALSLNFHSFEGLFLITGICTLIGLLVSETVIWQRPILLAKAYSHKFLFSTPPPSPQTRVHPTQDSTHGIEAV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1975 330 MobiDBLite consensus disorder prediction 310 330 - -
Aed6g1975 330 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 1 104 - -
Aed6g1975 330 Pfam Bacterial extracellular solute-binding proteins, family 3 112 238 IPR001638 -
Aed6g1975 330 Gene3D - 112 199 - -
Aed6g1975 330 SMART GluR_14 34 238 IPR001320 GO:0015276|GO:0016020
Aed6g1975 330 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 105 326 - -
Aed6g1975 330 SUPERFAMILY Periplasmic binding protein-like II 34 239 - -
Aed6g1975 330 Gene3D - 200 236 - -
Aed6g1975 330 Gene3D - 30 103 - -
Aed6g1975 330 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 104 - -
Aed6g1975 330 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 105 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1975 Aed-Chr6 22664978 22666757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1975 105 303 Ion Channels AT2G29110 39.070 6.71e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1975 K05387 - gmx:100807817 355.14