Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1974 ATGGTTAAGTCCTTTCTCTCTTGGTTTCTGATTTGTTTGCTCGTGCTGCTACAGACACAGACACCAACGGGGAATGGGTCAAATGCAACACCCAAGTGGCCTGAAGTGATCCATTTGAGAGTAGGGGTACCCAAGAAAGATGGTTTCCGCCAATTTGTGAGTGTAGACCAAAAGAACAACGTATCTGGATATTGCATAGACGTTTTCAATGCAGTTGTAAAGCTCTTACCTTTCAAGGTTTCTCTAAATATTACACCTTATGTTGTTGATTCAAATGAAAGTTCCAGAGCTGGATCATACGATTCACTTCTCCAACAGATCCCAACTAAGTTTAAGCCGTGGCAGCTGAAGGCATATAGCAATAGTTCTGACTACCGTGATGCTTTAAAAAGGGGAGGCGAAGGAGGGGGTGTTGCAGCAATATTCGATGAAGTGCCTTACCTTAAAGTCTTCCTTCAAGAACACGGATCCAATAATTACATCTTGGTCGGCCCCAGATATAGAAATGATGGCTTTGGTTTTGCATTCCGTTTAAACTCGAATCTCACGGGTTACTTTTCTAGAGCGATCTTGAACGTGACTGAAAGTGAAGACTTGATGAATGAAATAGAGGAAAAGTATTTTGGGAAGAAGGATGATATTGGAGGACAAGACCCGTCTGGGGAAATATCTTCCGCTAGTACTCCAAGTCTCAATTTTCATAGCTTTGCGGGACTGTTCTTGATCACTGGCATAGCTACGTTATTAGCGCTATTGGTCTCAGAAACTGTTATATGGCAAAAGCCCATTTTGATAGCTAAAGCATACGGTCAGAGGTATTTGTTCACCACTCCACCACCTTCTGCAGAAACAAGTGTTCATGATTCAACACACAGAATAGAGGTCGTTTAA 891 0.422 MVKSFLSWFLICLLVLLQTQTPTGNGSNATPKWPEVIHLRVGVPKKDGFRQFVSVDQKNNVSGYCIDVFNAVVKLLPFKVSLNITPYVVDSNESSRAGSYDSLLQQIPTKFKPWQLKAYSNSSDYRDALKRGGEGGGVAAIFDEVPYLKVFLQEHGSNNYILVGPRYRNDGFGFAFRLNSNLTGYFSRAILNVTESEDLMNEIEEKYFGKKDDIGGQDPSGEISSASTPSLNFHSFAGLFLITGIATLLALLVSETVIWQKPILIAKAYGQRYLFTTPPPSAETSVHDSTHRIEVV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1974 296 Gene3D - 36 213 - -
Aed6g1974 296 SUPERFAMILY Periplasmic binding protein-like II 3 210 - -
Aed6g1974 296 SMART GluR_14 38 210 IPR001320 GO:0015276|GO:0016020
Aed6g1974 296 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 4 111 - -
Aed6g1974 296 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 110 288 - -
Aed6g1974 296 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 4 111 - -
Aed6g1974 296 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 110 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1974 Aed-Chr6 22661395 22663140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1974 115 272 Ion Channels AT2G29100 39.655 4.42e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1974 K05387 - gmx:100783907 271.552