Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1967 ATGCTATCAAGATCTTGCTTGGGGCTATTGAATTTGGTGTCAGTGGATGATTACCAAGCGCTGGGTCGCGTCCCGCGGGTGTTGACGACGGTGGCCGGAGACTTGCCGGAGTTGGACATCAACGGCATGGAGAATTCGGGATCCGACGACGTCCTTTCGCCGGTGCCGCGCGAACGGAGGATCGTGGTCGCGAATCAGTTACCGATACGCGCGTTTCGCGAGGGGAAGAAATGGAGGTTCGAGTGGGACAAGGACAGCCTCGTCCTTCAGCTGAAAGACGGGTTTCCTTCTGACGTGGAAGTGTTGTACGTGGGTTCTCTGAAAGCAGAGATCGAACCCTTGGAACAAGAAGAAGTGGCGCAGTTACTTCTTGAAAGCTTCCGCTGCGTACCAACGTTTATTCCTTCAGAGGTTCACAACAAGTTCTACCACGGTTTCTGCAAGCATTACCTCTGGCCTCTGTTCCACTACATGCTACCCATGTCGCCGAGCCAAGGCGCGCGTTTCGACCGCGAGCAGTGGAAGGCTTATGTTCTCGCCAACAGGATCTTCGCCGACAAGGTCACCGAGGTTATCAACCCGGACGAGGATTATGTCTGGATTCACGATTACCACCTCATGATATTGCCAACTTTTCTCCGGAAGCGGTTCCACCGCGTCAAGCTGGGGTTCTTCTTGCACAACACGTTTCCCTCCTCGGAGATATACCGGACTCTCCCGGTGCGCGAGGACATTCTCCGCGCCTTTTTGAACTGCGATTTGATCGGGTTCCACACGTTCGACTACGCGCGCCATTTTTTGTCGTGTTGCAGTAGGATGTTGGGCCTGGATTACGAGTCCAAGAGGGGTTACATTGGTTTGGATTACTACGGCCGCACCGTCACCGTTAAGATCCTCCCCGCGGGGATTCACATGGGGCTGTTGGAGTCAGTCTTGTCGTTACCTCAGACGGCGTTAAGGGTGAAGGAATTGAAGAAGGAGTTTCAAGGAAAGATTGTTATATTAGGAGTGGATGACATGGACTTGTTCAAAGGTATTAGTTTGAAGTTCCTGGCTTTGGGGAAGCTTCTGGAAGTGGATGAAAGTTTACGCGGTCGTGTGGTGTTGGTTCAGATTCTGAACGCGGCGAGGAGCAGAGGGAAGGACATTCAGGACGTGAAGAACGAGAGCGAAGCTATTGCCAGAGAGATCAATGACAAATATTCCCAACCCGGGTACCAGCCTATTGTTTACATCAATGGACCAATCTCCACGCAGGAGAAGGCTGCGTATTACGCTGTTTCTGAGTGCTGCGTTGTGAATGCGGTGAGGGATGGGATGAATTTGGTGCCTTATGAGTACACTGTTTGTAGGCAGGGGAGTGTTGCTCTGGACAAGGAGCTTGAGGTTGAAGGTGGTGAGGATCATAAAAAAGTCCTTAAACAGAGCGTTATCATTGTTTCTGAGTTCATAGGGTGTTCCCCTTCGCTCAGTGGAGCCATCAGGGTGAATCCTTGGAACATTGAAGAAGTCGCCGAGGCCATGAATTCGGCTGTGACAATGTCGGAGGCAGAGAAGCATCTGCGCCACGAGAAGCATTATAAGTACATAAGCTCTCACGATGTGGCGTACTGGGCAAGGAGTTTTGATCAGGATTTAGATAGAGCTTGTAGGGAGCATTACTCCAAGAGGTACTGGGGTGTTGGATTGGGCTTGGGGTTTAGAATTGTTGCTTTGGATCCTACCTTTAGGAAGCTCTCTGTGGATCACATTGCCTCTGCATATAGAGATACACACAGTCGGTTGATACTTTTGGACTACGATGGCACCATGATGCCGCAGGCAACCATAAACAAGACTCCAAGCAGGGAAGTTATTACTGTCTTGAATTATTTATGCAATGATCCTGAAAATATGGTATTCATTGTTAGCGGCAGGGATAAGGATTGTTTGGCCAACTGGTTTTCTCCATGTGAGAAATTGGGTCTCTCTGCTGAGCACGGTTACTTCACTAGCAAGGGTAAAGTGGTGGAAGATCTTATCTCAATCATGCGAAGTAAGGATAAGTCACCAGATTTTCTACTGTGCATAGGAGATGATCGATCAGATGAAGATATGTTTGAAAGCATTGCTCGTTCATTGGATGGCAGTTGTGTTGATGTTGCAAATTGTAGGGGTAAAGCACGAGTTTCATATGATGAGGCTCAGAGCACGCGGTCGGCAGAAGAAGCTTCGGATGCAGTACCAACCACACACACATTTTCCTCTGACTTCTTCGCCATTAACTAA 2268 0.4947 MLSRSCLGLLNLVSVDDYQALGRVPRVLTTVAGDLPELDINGMENSGSDDVLSPVPRERRIVVANQLPIRAFREGKKWRFEWDKDSLVLQLKDGFPSDVEVLYVGSLKAEIEPLEQEEVAQLLLESFRCVPTFIPSEVHNKFYHGFCKHYLWPLFHYMLPMSPSQGARFDREQWKAYVLANRIFADKVTEVINPDEDYVWIHDYHLMILPTFLRKRFHRVKLGFFLHNTFPSSEIYRTLPVREDILRAFLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTVKILPAGIHMGLLESVLSLPQTALRVKELKKEFQGKIVILGVDDMDLFKGISLKFLALGKLLEVDESLRGRVVLVQILNAARSRGKDIQDVKNESEAIAREINDKYSQPGYQPIVYINGPISTQEKAAYYAVSECCVVNAVRDGMNLVPYEYTVCRQGSVALDKELEVEGGEDHKKVLKQSVIIVSEFIGCSPSLSGAIRVNPWNIEEVAEAMNSAVTMSEAEKHLRHEKHYKYISSHDVAYWARSFDQDLDRACREHYSKRYWGVGLGLGFRIVALDPTFRKLSVDHIASAYRDTHSRLILLDYDGTMMPQATINKTPSREVITVLNYLCNDPENMVFIVSGRDKDCLANWFSPCEKLGLSAEHGYFTSKGKVVEDLISIMRSKDKSPDFLLCIGDDRSDEDMFESIARSLDGSCVDVANCRGKARVSYDEAQSTRSAEEASDAVPTTHTFSSDFFAIN 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1967 755 Pfam Glycosyltransferase family 20 59 547 IPR001830 GO:0003824|GO:0005992
Aed6g1967 755 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 665 711 IPR001830 GO:0003824|GO:0005992
Aed6g1967 755 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 551 - -
Aed6g1967 755 CDD GT20_TPS 59 546 IPR001830 GO:0003824|GO:0005992
Aed6g1967 755 Gene3D Glycogen Phosphorylase B; 53 310 - -
Aed6g1967 755 SUPERFAMILY HAD-like 594 716 IPR036412 -
Aed6g1967 755 Pfam Trehalose-phosphatase 597 664 IPR003337 GO:0003824|GO:0005992
Aed6g1967 755 Gene3D Glycogen Phosphorylase B; 311 531 - -
Aed6g1967 755 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 664 IPR001830 GO:0003824|GO:0005992
Aed6g1967 755 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 664 - -
Aed6g1967 755 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 665 711 - -
Aed6g1967 755 Gene3D - 593 741 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1967 Aed-Chr6 22596139 22602039 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1967 665 712 Trehalose Biosynthesis Gene Families AT2G18700 69.388 6.21e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1967 K16055 - gmx:100810498 1270.76